Referenced by ⇅
Year
datelife : Scientific Data on Time of Lineage Divergence for Your Taxa (Version 0.6.8)
2022
MetaIntegrator : Meta-Analysis of Gene Expression Data (Version 2.1.3)
2016
SIPmg : Statistical Analysis to Identify Isotope Incorporating MAGs (Version 1.4.1)
2023
ExpImage : Analysis of Images in Experiments (Version 0.10.1)
2021
seeker : Simplified Fetching and Processing of Microarray and RNA-Seq Data (Version 1.1.6)
2022
CAMML : Cell-Typing using Variance Adjusted Mahalanobis Distances with Multi-Labeling (Version 1.0.0)
2021
CNVScope : A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization (Version 3.7.2)
2018
GeneSelectR : 'GeneSelectR' - Comprehensive Feature Selection Workflow for Bulk RNAseq Datasets (Version 1.0.1)
2023
LCMSQA : Liquid Chromatography/Mass Spectrometry (LC/MS) Quality Assessment (Version 1.0.2)
2023
MOCHA : Modeling for Single-Cell Open Chromatin Analysis (Version 1.1.0)
2022
MetabolSSMF : Simplex-Structured Matrix Factorisation for Metabolomics Analysis (Version 0.1.0)
2025
MuPETFlow : Multiple Ploidy Estimation Tool for all Species Compatible with Flow Cytometry (Version 0.1.1)
2025
NMF : Algorithms and Framework for Nonnegative Matrix Factorization (NMF) (Version 0.28)
2009
PCMBase : Simulation and Likelihood Calculation of Phylogenetic Comparative Models (Version 1.2.15)
2018
ProtE : Processing Proteomics Data, Statistical Analysis and Visualization (Version 1.0.3)
2025
RAMClustR : Mass Spectrometry Metabolomics Feature Clustering and Interpretation (Version 1.3.1)
2019
RcmdrPlugin.BiclustGUI : 'Rcmdr' Plug-in GUI for Biclustering (Version 1.1.3.1)
2016
SCRIP : An Accurate Simulator for Single-Cell RNA Sequencing Data (Version 1.0.0)
2021
aroma.core : Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework (Version 3.3.2)
2009
available : Check if the Title of a Package is Available, Appropriate and Interesting (Version 1.1.0)
2017
discourseGT : Analyze Group Patterns using Graph Theory in Educational Settings (Version 1.2.0)
2020
geneExpressionFromGEO : Easily Downloads a Gene Expression Dataset from a GEO Code and Retrieves the Gene Symbols of Its Probesets (Version 1.3)
2020
librarian : Install, Update, Load Packages from CRAN, 'GitHub', and 'Bioconductor' in One Step (Version 1.8.1)
2018
maGUI : A Graphical User Interface for Microarray Data Analysis and Annotation (Version 4.0)
2015
mergen : AI-Driven Code Generation, Explanation and Execution for Data Analysis (Version 0.2.1)
2023
metacoder : Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data (Version 0.3.8)
2016
orthGS : Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants (Version 0.1.8)
2024
pathwayTMB : Pathway Based Tumor Mutational Burden (Version 0.1.3)
2021
pkggraph : A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories (Version 0.2.3)
2017
rsconnect : Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io', and 'RPubs' (Version 1.7.0)
2016
switchr : Installing, Managing, and Switching Between Distinct Sets of Installed Packages (Version 0.14.8)
2015
umiAnalyzer : Tools for Analyzing Sequencing Data with Unique Molecular Identifiers (Version 1.0.0)
2021
CAMML
Multi-Labeling : (Version )
0
SRTsim : Simulator for Spatially Resolved Transcriptomics (Version 0.99.7)
2022
bulkAnalyseR : Interactive Shiny App for Bulk Sequencing Data (Version 1.1.0)
2022
ggsector : Draw Sectors (Version 1.7.0)
2022
ClustAssess : Tools for Assessing Clustering (Version 1.1.0)
2021
ClusterGVis : One-Step to Cluster and Visualize Gene Expression Data (Version 0.1.4)
2025
CytoProfile : Cytokine Profiling Analysis Tool (Version 0.2.3)
2025
BOLDconnectR
Data : (Version )
0
BayesianPlatformDesignTimeTrend : Simulate and Analyse Bayesian Platform Trial with Time Trend (Version 1.2.3)
2023
BeeBDC : Occurrence Data Cleaning (Version 1.3.2)
2023
CALANGO : Comparative Analysis with Annotation-Based Genomic Components (Version 1.0.20)
2021
FastUtils : Fast, Readable Utility Functions (Version 0.2.1)
2024
HiCociety : Inferring Chromatin Interaction Modules from 3C-Based Data (Version 0.1.38)
2025
LCMSQA
Assessment : (Version )
0
MetabolSSMF
Analysis : (Version )
0
MiscMetabar : Miscellaneous Functions for Metabarcoding Analysis (Version 0.14.4)
2024
NMF
(NMF) : (Version )
0
RCPA : Consensus Pathway Analysis (Version 0.2.8)
2023
RepeatedHighDim : Methods for High-Dimensional Repeated Measures Data (Version 2.5.0)
2011
SurprisalAnalysis : Information Theoretic Analysis of Gene Expression Data (Version 3.0.0)
2025
TcGSA : Time-Course Gene Set Analysis (Version 0.12.13)
2014
anyLib : Install and Load Any Package from CRAN, Bioconductor or Github (Version 1.0.5)
2018
autograph : Automatic Plotting of Many Graphs (Version 0.5.0)
2025
available
Interesting : (Version )
0
bbl : Boltzmann Bayes Learner (Version 1.0.0)
2019
convertid
Biomart : (Version )
0
deepdep : Visualise and Explore the Deep Dependencies of R Packages (Version 0.4.4)
2020
demulticoder : Simultaneous Analysis of Multiplexed Metabarcodes (Version 0.1.2)
2025
dependentsimr : Simulate Omics-Scale Data with Dependency (Version 1.0.0.0)
2025
devtools : Tools to Make Developing R Packages Easier (Version 2.4.6)
2011
discourseGT
Settings : (Version )
0
dowser : B Cell Receptor Phylogenetics Toolkit (Version 2.4.0)
2021
easyRef : Easy Reference Generation for R Packages (Version 0.1.0)
2025
evanverse : Utility Functions for Data Analysis and Visualization (Version 0.3.7)
2025
genBaRcode : Analysis and Visualization Tools for Genetic Barcode Data (Version 1.2.8)
2017
ggm : Graphical Markov Models with Mixed Graphs (Version 2.5.2)
2003
gpcp : Genomic Prediction of Cross Performance (Version 0.1.0)
2024
inDAGO : A GUI for Dual and Bulk RNA-Sequencing Analysis (Version 1.0.3)
2025
influential : Identification and Classification of the Most Influential Nodes (Version 2.2.9)
2020
lipidomeR : Integrative Visualizations of the Lipidome (Version 0.1.2)
2020
maGUI
Annotation : (Version )
0
mergen
Analysis : (Version )
0
multiclassPairs : Build MultiClass Pair-Based Classifiers using TSPs or RF (Version 0.4.3)
2020
pacman : Package Management Tool (Version 0.5.1)
2015
pcutils : Some Useful Functions for Statistics and Visualization (Version 0.2.8)
2023
pkgndep : Analyze Dependency Heaviness of R Packages (Version 1.99.3)
2020
pliman : Tools for Plant Image Analysis (Version 3.1.1)
2021
rafalib : Convenience Functions for Routine Data Exploration (Version 1.0.4)
2015
renv : Project Environments (Version 1.1.6)
2019
risk.assessr : Assessing Package Risk Metrics (Version 3.0.1)
2025
riskmetric : Risk Metrics to Evaluating R Packages (Version 0.2.6)
2021
rjtools : Preparing, Checking, and Submitting Articles to the 'R Journal' (Version 1.0.18.1)
2022
rvcheck : R/Package Version Check (Version 0.2.1)
2016
rworkflows : Test, Document, Containerise, and Deploy R Packages (Version 1.0.8)
2022
tidyHeatmap : A Tidy Implementation of Heatmap (Version 1.13.1)
2020
tinyarray : Expression Data Analysis and Visualization (Version 2.4.3)
2021
umiAnalyzer
Identifiers : (Version )
0
updateme : Informative Messages About Outdated Packages (Version 0.1.0)
2024
wrswoR : Weighted Random Sampling without Replacement (Version 1.2.0)
2016
zenplots : Zigzag Expanded Navigation Plots (Version 1.0.7)
2016
Showing 1-92 of 92
RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN).
Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.
