R Package Scholar
27,072

gtools: Various R Programming Tools

Gregory R. Warnes  Ben Bolker  Thomas Lumley  Arni Magnusson  Bill Venables  Genei Ryodan  Steffen Moeller  Ian Wilson  Mark Davis  Nitin Jain  Scott Chamberlain   View description and downloadsView dependenciesGitHub project

2005 Published
3.9.5 Version
0 Citations
11 Authors
Referenced by ⇅ Year
ANTs: Animal Network Toolkit Software (Version 0.0.16)

2021
aRchi: Quantitative Structural Model ("QSM") Treatment for Tree Architecture (Version 2.1.3)

2021
Biocomb: Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis (Version 0.4)

2015
bmotif: Motif Analyses of Bipartite Networks (Version 2.0.2)

2018
coalitions: Bayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies (Version 0.6.24)

2018
coopProductGame: Cooperative Aspects of Linear Production Programming Problems (Version 2.0)

2018
dnapath: Differential Network Analysis using Gene Pathways (Version 0.7.4)

2020
DOBAD: Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains (Version 1.0.6)

2011
hier.part: Hierarchical Partitioning (Version 1.0-6)

2003
MasterBayes: ML and MCMC Methods for Pedigree Reconstruction and Analysis (Version 2.58)

2006
metaMix: Bayesian Mixture Analysis for Metagenomic Community Profiling (Version 0.3)

2014
microsamplingDesign: Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis (Version 1.0.8)

2018
minimaxdesign: Minimax and Minimax Projection Designs (Version 0.1.5)

2016
muHVT: Constructing Hierarchical Voronoi Tessellations and Overlay Heatmap for Data Analysis (Version 3.0.0)

2018
NBBttest: Negative Binomial Beta t-Test (Version 1.0.1)

2020
netchain: Inferring Causal Effects on Collective Outcomes under Interference (Version 0.2.0)

2019
paleofire: Analysis of Charcoal Records from the Global Charcoal Database (Version 1.2.4)

2014
rabhit: Inference Tool for Antibody Haplotype (Version 0.2.5)

2019
RCPmod: Regions of Common Profiles Modelling with Mixtures-of-Experts (Version 2.192)

2013
RegularizedSCA: Regularized Simultaneous Component Based Data Integration (Version 0.5.4)

2017
ReorderCluster: Reordering the Dendrogram According to the Class Labels (Version 2.0)

2014
Rlda: Bayesian LDA for Mixed-Membership Clustering Analysis (Version 0.2.6)

2017
scImmuneGraph: Visualize the Basic Characteristics of Single-Cell Immune Repertoire (Version 1.1.3)

2021
spqdep: Testing for Spatial Independence of Qualitative Data in Cross Section (Version 0.1.2)

2022
supcluster: Supervised Cluster Analysis (Version 1.0.1)

2015
SourceSet: A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways (Version 0.1.5)

2018
dagHMM: Directed Acyclic Graph HMM with TAN Structured Emissions (Version 0.1.0)

2023
fwildclusterboot: Fast Wild Cluster Bootstrap Inference for Linear Models (Version 0.13.0)

2021
PANPRSnext: Building PRS Models Based on Summary Statistics of GWAs (Version 1.2.0)

2023
HKprocess: Hurst-Kolmogorov Process (Version 0.1-1)

2016
digitalDLSorteR: Deconvolution of Bulk RNA-Seq Data Based on Deep Learning (Version 1.1.0)

2021
qeML: Quick and Easy Machine Learning Tools (Version 1.1)

2023
qgraph: Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation (Version 1.9.8)

2011
ASMap: Linkage Map Construction using the MSTmap Algorithm (Version 1.0-8)

2014
AgroR: Experimental Statistics and Graphics for Agricultural Sciences (Version 1.3.6)

2021
AutoWMM: Perform the Weighted Multiplier Method on Trees (Version 1.0.1)

2024
AutoWeatherIndices: Calculating Weather Indices (Version 0.1.0)

2022
BAMBI: Bivariate Angular Mixture Models (Version 2.3.6)

2017
BSPBSS: Bayesian Spatial Blind Source Separation (Version 1.0.5)

2022
BayesMultiMode: Bayesian Mode Inference (Version 0.7.3)

2022
BradleyTerry2: Bradley-Terry Models (Version 1.1-2)

2010
CARBayesST: Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data (Version 4.0)

2014
CeRNASeek: Identification and Analysis of ceRNA Regulation (Version 2.1.3)

2019
ClickClustCont: Mixtures of Continuous Time Markov Models (Version 0.1.7)

2019
CoClust: Copula Based Cluster Analysis (Version 0.3-2)

2012
CoImp: Parametric and Non-Parametric Copula-Based Imputation Methods (Version 2.0.1)

2014
CoMiRe: Convex Mixture Regression (Version 0.8)

2020
CohortPlat: Simulation of Cohort Platform Trials for Combination Treatments (Version 1.0.5)

2021
ConsRank: Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach (Version 2.1.4)

2015
CoopGame: Important Concepts of Cooperative Game Theory (Version 0.2.2)

2019
DisHet: Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples (Version 1.0.0)

2017
EBMAforecast: Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms (Version 1.0.32)

2012
EDCimport: Import Data from EDC Software (Version 0.5.1)

2022
EWSmethods: Forecasting Tipping Points at the Community Level (Version 1.3.1)

2023
ExtremalDep: Extremal Dependence Models (Version 0.0.4-2)

2019
FAMetA: Fatty Acid Metabolic Analysis (Version 0.1.6)

2021
GGMselect: Gaussian Graphs Models Selection (Version 0.1-12.7)

2009
GLMcat: Generalized Linear Models for Categorical Responses (Version 0.2.7)

2020
GSM: Gamma Shape Mixture (Version 1.3.2)

2007
GameTheory: Cooperative Game Theory (Version 2.7.1)

2015
GenEst: Generalized Mortality Estimator (Version 1.4.9)

2018
GhostKnockoff: The Knockoff Inference Using Summary Statistics (Version 0.1.0)

2021
HUM: Compute HUM Value and Visualize ROC Curves (Version 2.0)

2014
HistData: Data Sets from the History of Statistics and Data Visualization (Version 0.9-1)

2009
HyperG: Hypergraphs in R (Version 1.0.0)

2021
IBRtools: Integrating Biomarker-Based Assessments and Radarchart Creation (Version 0.1.3)

2022
IDPSurvival: Imprecise Dirichlet Process for Survival Analysis (Version 1.2)

2014
ISAT: Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output (Version 1.0.5)

2018
IsoCheck: Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions (Version 0.1.0)

2020
JAGStree: Automatically Write 'JAGS' Code for Hierarchical Bayesian Models on Trees (Version 1.0.1)

0
Kcop: Smooth Test for Equality of Copulas and Clustering Multivariate (Version 1.0.0)

2022
LINselect: Selection of Linear Estimators (Version 1.1.5)

2013
LSAmitR: Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R' (Version 1.0-3)

2016
LikertMakeR: Synthesise and Correlate Rating-Scale Data (Version 0.3.0)

2022
MARVEL: Revealing Splicing Dynamics at Single-Cell Resolution (Version 1.4.0)

2021
MCARtest: Optimal Nonparametric Testing of Missing Completely at Random (Version 1.2.2)

2022
MDplot: Visualising Molecular Dynamics Analyses (Version 1.0.1)

2016
MEPDF: Creation of Empirical Density Functions Based on Multivariate Data (Version 3.0)

2017
MRPC: PC Algorithm with the Principle of Mendelian Randomization (Version 3.1.0)

2018
MSRDT: Multi-State Reliability Demonstration Tests (MSRDT) (Version 0.1.0)

2020
MSclust: Multiple-Scaled Clustering (Version 1.0.4)

2022
MaOEA: Many Objective Evolutionary Algorithm (Version 0.6.2)

2019
MarkowitzR: Statistical Significance of the Markowitz Portfolio (Version 1.0.3)

2014
MetabolAnalyze: Probabilistic Latent Variable Models for Metabolomic Data (Version 1.3.1)

2010
MethodOpt: Advanced Method Optimization for Spectra-Generating Sampling and Analysis Instrumentation (Version 1.0.0)

2024
MuViCP: MultiClass Visualizable Classification using Combination of Projections (Version 1.3.2)

2016
MultiObjMatch: Multi-Objective Matching Algorithm (Version 1.0.0)

2022
NPCDTools: The Nonparametric Classification Methods for Cognitive Diagnosis (Version 1.0)

2024
NSM3: Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition (Version 1.19)

2013
NetMix: Dynamic Mixed-Membership Network Regression Model (Version 0.2.0.2)

2019
NonParRolCor: a Non-Parametric Statistical Significance Test for Rolling Window Correlation (Version 0.8.0)

2021
OWEA: Optimal Weight Exchange Algorithm for Optimal Designs for Three Models (Version 0.1.2)

2018
PLMIX: Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings (Version 2.1.1)

2016
PPbigdata: Projection Pursuit for Big Data Based on Data Nuggets (Version 1.0.0)

2024
PRECAST: Embedding and Clustering with Alignment for Spatial Datasets (Version 1.6.5)

2022
PSSMCOOL: Features Extracted from Position Specific Scoring Matrix (PSSM) (Version 0.2.4)

2020
PSW: Propensity Score Weighting Methods for Dichotomous Treatments (Version 1.1-3)

2017
PairViz: Visualization using Graph Traversal (Version 1.3.6)

2008
PolyPatEx: Paternity Exclusion in Autopolyploid Species (Version 0.9.2)

2014
PopED: Population (and Individual) Optimal Experimental Design (Version 0.7.0)

2014
ProFAST: Probabilistic Factor Analysis for Spatially-Aware Dimension Reduction (Version 1.4)

2023
QFASA: Quantitative Fatty Acid Signature Analysis (Version 1.2.1)

2016
QTLEMM: QTL Mapping and Hotspots Detection (Version 2.1.0)

2021
Qtools: Utilities for Quantiles (Version 1.5.9)

2016
R.filesets: Easy Handling of and Access to Files Organized in Structured Directories (Version 2.15.1)

2009
RBE3: Estimation and Additional Tools for Quantile Generalized Beta Regression Model (Version 1.1)

2023
REQS: R/EQS Interface (Version 0.8-13)

2008
RI2by2: Randomization Inference for Treatment Effects on a Binary Outcome (Version 1.4)

2014
RankAggreg: Weighted Rank Aggregation (Version 0.6.6)

2008
ReDirection: Predict Dominant Direction of Reactions of a Biochemical Network (Version 1.0.1)

2021
RevEcoR: Reverse Ecology Analysis on Microbiome (Version 0.99.3)

2015
RobMixReg: Robust Mixture Regression (Version 1.1.0)

2020
RolWinMulCor: Subroutines to Estimate Rolling Window Multiple Correlation (Version 1.2.0)

2020
SCdeconR: Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference (Version 1.0.0)

2024
SFPL: Sparse Fused Plackett-Luce (Version 1.0.0)

2024
SGP: Student Growth Percentiles & Percentile Growth Trajectories (Version 2.2-0.0)

2008
SOHPIE: Statistical Approach via Pseudo-Value Information and Estimation (Version 1.0.6)

2023
SSHAARP: Searching Shared HLA Amino Acid Residue Prevalence (Version 1.1.0)

2020
STEPCAM: ABC-SMC Inference of STEPCAM (Version 1.2)

2014
SUSY: Surrogate Synchrony (Version 0.1.0)

2022
SensoMineR: Sensory Data Analysis (Version 1.27)

2005
ShapDoE: Approximation of the Shapley Values Based on Experimental Designs (Version 1.0.0)

2024
SparseLPM: The Sparse Latent Position Model for Nonnegative Interaction Data (Version 1.0)

2018
SpatialDDLS: Deconvolution of Spatial Transcriptomics Data Based on Neural Networks (Version 1.0.3)

2023
SummaryLasso: Building Polygenic Risk Score Using GWAS Summary Statistics (Version 1.2.1)

2019
TDCM: The Transition Diagnostic Classification Model Framework (Version 0.1.0)

2024
TML: Tropical Geometry Tools for Machine Learning (Version 2.3.0)

2023
TSANN: Time Series Artificial Neural Network (Version 0.1.0)

2021
TUvalues: Tools for Calculating Allocations in Game Theory using Exact and Approximated Methods (Version 0.1.0)

2024
TcGSA: Time-Course Gene Set Analysis (Version 0.12.10)

2014
TiPS: Trajectories and Phylogenies Simulator (Version 1.2.3)

2021
Ultimixt: Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior (Version 2.1)

2015
VecDep: Measuring Copula-Based Dependence Between Random Vectors (Version 0.1.3)

0
ZINAR1: Simulates ZINAR(1) Model and Estimates Its Parameters Under Frequentist Approach (Version 0.1.0)

2022
adproclus: Additive Profile Clustering Algorithms (Version 2.0.0)

2023
archiDART: Plant Root System Architecture Analysis Using DART and RSML Files (Version 3.4)

2014
atmopt: Analysis-of-Marginal-Tail-Means (Version 0.1.0)

2018
ausplotsR: TERN AusPlots Australian Ecosystem Monitoring Data (Version 2.0.5)

2020
autohrf: Automated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis (Version 1.1.3)

2022
autostats: Auto Stats (Version 0.4.1)

2021
baycn: Bayesian Inference for Causal Networks (Version 1.2.0)

2019
beezdiscounting: Behavioral Economic Easy Discounting (Version 0.3.1)

2023
bikm1: Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets (Version 1.1.0)

2019
binovisualfields: Depth-Dependent Binocular Visual Fields Simulation (Version 0.1.1)

2020
bootCT: Bootstrapping the ARDL Tests for Cointegration (Version 2.1.0)

2022
bootnet: Bootstrap Methods for Various Network Estimation Routines (Version 1.6)

2015
bpgmm: Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models (Version 1.0.9)

2019
bumblebee: Quantify Disease Transmission Within and Between Population Groups (Version 0.1.0)

2021
cats: Cohort Platform Trial Simulation (Version 1.0.2)

2022
causalDisco: Tools for Causal Discovery on Observational Data (Version 0.9.1)

2022
cia: Learn and Apply Directed Acyclic Graphs for Causal Inference (Version 1.0.0)

0
codacore: Learning Sparse Log-Ratios for Compositional Data (Version 0.0.4)

2022
codalm: Transformation-Free Linear Regression for Compositional Outcomes and Predictors (Version 0.1.2)

2020
collpcm: Collapsed Latent Position Cluster Model for Social Networks (Version 1.4)

2017
colorrepel: Repel Visually Similar Colors for Colorblind Users in Various Plots (Version 0.3.0)

2024
combiroc: Selection and Ranking of Omics Biomarkers Combinations Made Easy (Version 0.3.4)

2021
communication: Feature Extraction and Model Estimation for Audio of Human Speech (Version 0.1)

2021
conStruct: Models Spatially Continuous and Discrete Population Genetic Structure (Version 1.0.6)

2018
crossdes: Construction of Crossover Designs (Version 1.1-2)

2004
crov: Constrained Regression Model for an Ordinal Response and Ordinal Predictors (Version 0.3.0)

2018
cv: Cross-Validating Regression Models (Version 2.0.3)

2023
dice: Calculate probabilities of various dice-rolling events (Version 1.2)

2007
didec: Directed Dependence Coefficient (Version 0.1.0)

2024
dirichletprocess: Build Dirichlet Process Objects for Bayesian Modelling (Version 0.4.2)

2018
doseSens: Conduct Sensitivity Analysis with Continuous Exposures and Binary Outcomes (Version 0.1.0)

2024
dotsViolin: Dot Plots Mimicking Violin Plots (Version 0.0.1)

2023
drc: Analysis of Dose-Response Curves (Version 3.0-1)

2005
dsld: Data Science Looks at Discrimination (Version 0.2.2)

2024
dtp: Dynamic Panel Threshold Model (Version 0.1.0)

2018
dwp: Density-Weighted Proportion (Version 1.1)

2022
dynpanel: Dynamic Panel Data Models (Version 0.1.0)

2016
eSIR: Extended State-Space SIR Models (Version 0.4.2)

2021
easylabel: Interactive Scatter Plot and Volcano Plot Labels (Version 0.2.8)

2021
econullnetr: Null Model Analysis for Ecological Networks (Version 0.2.1)

2017
ecospat: Spatial Ecology Miscellaneous Methods (Version 4.1.1)

2014
epicmodel: Causal Modeling in Epidemiology (Version 0.1.1)

2024
epigraphdb: Interface Package for the 'EpiGraphDB' Platform (Version 0.2.3)

2020
erp.easy: Event-Related Potential (ERP) Data Exploration Made Easy (Version 1.1.0)

2015
escalation: A Modular Approach to Dose-Finding Clinical Trials (Version 0.1.10)

2020
expSBM: An Exponential Stochastic Block Model for Interaction Lengths (Version 1.3.5)

2019
factormodel: Factor Model Estimation Using Proxy Variables (Version 1.0)

2021
fastLink: Fast Probabilistic Record Linkage with Missing Data (Version 0.6.1)

2017
fastTopics: Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data (Version 0.6-192)

2022
fdapace: Functional Data Analysis and Empirical Dynamics (Version 0.6.0)

2016
finnts: Microsoft Finance Time Series Forecasting Framework (Version 0.5.0)

2022
forensIT: Information Theory Tools for Forensic Analysis (Version 1.0.0)

2023
forestGYM: Forest Growth and Yield Model Based on Clutter Model (Version 1.0.0)

0
formods: 'Shiny' Modules for General Tasks (Version 0.1.7)

2023
frequency: Easy Frequency Tables (Version 0.4.1)

2018
fsemipar: Estimation, Variable Selection and Prediction for Functional Semiparametric Models (Version 1.1.1)

2023
gambin: Fit the Gambin Model to Species Abundance Distributions (Version 2.5.0)

2013
gdata: Various R Programming Tools for Data Manipulation (Version 3.0.1)

2005
genetics: Population Genetics (Version 1.3.8.1.3)

2002
ggESDA: Exploratory Symbolic Data Analysis with 'ggplot2' (Version 0.2.0)

2022
gmodels: Various R Programming Tools for Model Fitting (Version 2.19.1)

2005
gplots: Various R Programming Tools for Plotting Data (Version 3.2.0)

2005
grapesAgri1: Collection of Shiny Apps for Agricultural Research Data Analysis (Version 1.1.0)

2021
graphPAF: Estimating and Displaying Population Attributable Fractions (Version 2.0.0)

2022
hierfstat: Estimation and Tests of Hierarchical F-Statistics (Version 0.5-11)

2004
highMLR: Feature Selection for High Dimensional Survival Data (Version 0.1.1)

2021
hydraulics: Basic Pipe and Open Channel Hydraulics (Version 0.7.0)

2020
iSTATS: A Graphical Interface to Perform STOCSY Analyses on NMR Data (Version 1.7)

2019
iccmult: Intracluster Correlation Coefficient (ICC) in Clustered Categorical Data (Version 1.0.1)

2024
icensBKL: Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre (Version 1.5)

2017
idiogramFISH: Shiny App. Idiograms with Marks and Karyotype Indices (Version 2.0.13)

2019
imputeMulti: Imputation Methods for Multivariate Multinomial Data (Version 0.8.4)

2016
inferCSN: Inferring Cell-Specific Gene Regulatory Network (Version 1.0.8)

2023
integr: An Implementation of Interaction Graphs of Aleks Jakulin (Version 1.0.0)

2019
kamila: Methods for Clustering Mixed-Type Data (Version 0.1.2)

2016
karyotapR: DNA Copy Number Analysis for Genome-Wide Tapestri Panels (Version 1.0.1)

2023
knockoff: The Knockoff Filter for Controlled Variable Selection (Version 0.3.6)

2014
lcra: Bayesian Joint Latent Class and Regression Models (Version 1.1.5)

2020
lddmm: Longitudinal Drift-Diffusion Mixed Models (LDDMM) (Version 0.4.2)

2021
learnPopGen: Population Genetic Simulations & Numerical Analysis (Version 1.0.4)

2018
lnmCluster: Perform Logistic Normal Multinomial Clustering for Microbiome Compositional Data (Version 0.3.1)

2022
ltmix: Left-Truncated Mixtures of Gamma, Weibull, and Lognormal Distributions (Version 0.2.2)

2019
marp: Model-Averaged Renewal Process (Version 0.1.0)

2022
mau: Decision Models with Multi Attribute Utility Theory (Version 0.1.2)

2017
mcMST: A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem (Version 1.1.1)

2017
mdw: Maximum Diversity Weighting (Version 2024.8-1)

2017
mgm: Estimating Time-Varying k-Order Mixed Graphical Models (Version 1.2-14)

2015
microhaplot: Microhaplotype Constructor and Visualizer (Version 1.0.1)

2019
mixedMem: Tools for Discrete Multivariate Mixed Membership Models (Version 1.1.2)

2015
modMax: Community Structure Detection via Modularity Maximization (Version 1.1)

2015
modnets: Modeling Moderated Networks (Version 0.9.0)

2021
movieROC: Visualizing the Decision Rules Underlying Binary Classification (Version 0.1.2)

2024
mrfse: Markov Random Field Structure Estimator (Version 0.4.2)

2019
mulset: Multiset Intersection Generator (Version 1.0.0)

2019
mvtmeta: Multivariate Meta-Analysis (Version 1.1)

2012
nardl: Nonlinear Cointegrating Autoregressive Distributed Lag Model (Version 0.1.6)

2017
neotoma2: Working with the Neotoma Paleoecology Database (Version 1.0.5)

2023
netSEM: Network Structural Equation Modeling (Version 0.6.2)

2018
nima: Nima Hejazi's R Toolbox (Version 0.6.2)

2016
noisySBM: Noisy Stochastic Block Mode: Graph Inference by Multiple Testing (Version 0.1.4)

2020
nparMD: Nonparametric Analysis of Multivariate Data in Factorial Designs (Version 0.2.1)

2018
ordinalpattern: Tests Based on Ordinal Patterns (Version 0.2.5)

2020
paleobioDB: Download and Process Data from the Paleobiology Database (Version 1.0.0)

2014
partition: Agglomerative Partitioning Framework for Dimension Reduction (Version 0.2.2)

2019
pcsstools: Tools for Regression Using Pre-Computed Summary Statistics (Version 0.1.2)

2021
phenopix: Process Digital Images of a Vegetation Cover (Version 2.4.4)

2017
pipe.design: Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design (Version 0.5.1)

2015
polySegratioMM: Bayesian Mixture Models for Marker Dosage in Autopolyploids (Version 0.6-4)

2009
ppsbm: Clustering in Longitudinal Networks (Version 0.2.2)

2018
projpred: Projection Predictive Feature Selection (Version 2.8.0)

2018
protHMM: Protein Feature Extraction from Profile Hidden Markov Models (Version 0.1.1)

2023
psfmi: Prediction Model Pooling, Selection and Performance Evaluation Across Multiply Imputed Datasets (Version 1.4.0)

2019
qtlpoly: Random-Effect Multiple QTL Mapping in Autopolyploids (Version 0.2.4)

2021
r4ss: R Code for Stock Synthesis (Version 1.44.0)

2009
rankrate: Joint Statistical Models for Preference Learning with Rankings and Ratings (Version 1.2.0)

2022
rattle: Graphical User Interface for Data Science in R (Version 5.5.1)

2013
rcompendium: Create a Package or Research Compendium Structure (Version 1.3)

2021
rdtLite: Provenance Collector (Version 1.4)

2018
ref.ICAR: Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data (Version 2.0.1)

2018
regmed: Regularized Mediation Analysis (Version 2.1.0)

2020
regtools: Regression and Classification Tools (Version 1.7.0)

2016
reservoir: Tools for Analysis, Design, and Operation of Water Supply Storages (Version 1.1.5)

2015
revpref: Tools for Computational Revealed Preference Analysis (Version 0.1.0)

2021
rmpw: Causal Mediation Analysis Using Weighting Approach (Version 0.0.5)

2017
robnptests: Robust Nonparametric Two-Sample Tests for Location/Scale (Version 1.1.0)

2021
rrMixture: Reduced-Rank Mixture Models (Version 0.1-2)

2022
rsyncrosim: The R Interface to 'SyncroSim' (Version 2.0.1)

2020
rubias: Bayesian Inference from the Conditional Genetic Stock Identification Model (Version 0.3.4)

2018
rvHPDT: Calling Haplotype-Based and Variant-Based Pedigree Disequilibrium Test for Rare Variants in Pedigrees (Version 4.0)

2013
sensitivity: Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)

2006
sensory: Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm (Version 1.1)

2014
shinystan: Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models (Version 2.6.0)

2015
signatureSurvival: Signature Survival Analysis (Version 1.0.0)

2023
spANOVA: Analysis of Field Trials with Geostatistics & Spatial AR Models (Version 0.99.4)

2019
ss3sim: Fisheries Stock Assessment Simulation Testing with Stock Synthesis (Version 1.0.3)

2014
ssifs: Stochastic Search Inconsistency Factor Selection (Version 1.0.2)

2023
staRdom: PARAFAC Analysis of EEMs from DOM (Version 1.1.28)

2018
starvz: R-Based Visualization Techniques for Task-Based Applications (Version 0.8.2)

2020
stockR: Identifying Stocks in Genetic Data (Version 1.0.76)

2018
survML: Tools for Flexible Survival Analysis Using Machine Learning (Version 1.2.0)

2023
svs: Tools for Semantic Vector Spaces (Version 3.1.1)

2015
textmineR: Functions for Text Mining and Topic Modeling (Version 3.0.5)

2015
tidylda: Latent Dirichlet Allocation Using 'tidyverse' Conventions (Version 0.0.5)

2021
tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data (Version 1.1.0)

2016
trialr: Clinical Trial Designs in 'rstan' (Version 0.1.6)

2017
uwedragon: Data Research, Access, Governance Network : Statistical Disclosure Control (Version 0.1.0)

2022
validata: Validate Data Frames (Version 0.1.0)

2021
veccompare: Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output (Version 0.1.0)

2017
vhica: Vertical and Horizontal Inheritance Consistence Analysis (Version 0.2.8)

2016
visualFields: Statistical Methods for Visual Fields (Version 1.0.5)

2012
votesys: Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods (Version 0.1.1)

2018
xhaz: Excess Hazard Modelling Considering Inappropriate Mortality Rates (Version 2.0.2)

2022
zoid: Bayesian Zero-and-One Inflated Dirichlet Regression Modelling (Version 1.3.1)

2021

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