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matrixcalc: Collection of Functions for Matrix Calculations

Frederick Novomestky •  View description and downloads View dependencies GitHub project

2007 Published
0 Citations
1 Authors
6 Revisions
1.0-6 Version
GPL-2 License
Referenced by ⇅ Year
BMTME: Bayesian Multi-Trait Multi-Environment for Genomic Selection Analysis (Version 1.0.19)

 		2019
BNPMIXcluster: Bayesian Nonparametric Model for Clustering with Mixed Scale Variables (Version 1.3)

 		2016
DUBStepR: Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data (Version 1.2.0)

 		2021
HRM: High-Dimensional Repeated Measures (Version 1.2.1)

 		2015
jlsm: Joint Latent Space Model for Social Networks with Multivariate Attributes (Version 0.1.0)

 		2021
lmvar: Linear Regression with Non-Constant Variances (Version 1.5.2)

 		2017
microsamplingDesign: Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis (Version 1.0.8)

 		2018
mixComp: Estimation of Order of Mixture Distributions (Version 0.1-2)

 		2020
Corbi: Collection of Rudimentary Bioinformatics Tools (Version 0.6-2)

 		2016
spectralGraphTopology: Learning Graphs from Data via Spectral Constraints (Version 0.2.3)

 		2019
ARCensReg: Fitting Univariate Censored Linear Regression Model with Autoregressive Errors (Version 3.0.2)

 		2016
BEDASSLE: Quantifies Effects of Geo/Eco Distance on Genetic Differentiation (Version 1.6.1)

 		2013
BayesianFactorZoo: Bayesian Solutions for the Factor Zoo: We Just Ran Two Quadrillion Models (Version 0.0.0.3)

 		2023
CTxCC: Multivariate Normal Mean Monitoring Through Critical-to-X Control Chart (Version 0.4.0)

 		2024
DCEM: Clustering Big Data using Expectation Maximization Star (EM*) Algorithm (Version 2.0.5)

 		2018
EMgaussian: Expectation-Maximization Algorithm for Multivariate Normal (Gaussian) with Missing Data (Version 0.2.2)

 		2024
FPCdpca: The FPCdpca Criterion on Distributed Principal Component Analysis (Version 0.4.0)

 		2024
HiGarrote: Nonnegative Garrote Method Incorporating Hierarchical Relationships (Version 2.0.0)

 		2024
MetaHD: A Multivariate Meta-Analysis Model for High-Dimensional Metabolomics Data (Version 0.1.3)

 		2024
OEFPIL: Optimal Estimation of Function Parameters by Iterated Linearization (Version 0.1.2)

 		2021
PRSPGx: Construct PGx PRS (Version 0.3.0)

 		2021
SIRE: Finding Feedback Effects in SEM and Testing for Their Significance (Version 1.1.0)

 		2018
SimTOST: Sample Size Estimation for Bio-Equivalence Trials Through Simulation (Version 1.0.2)

 		2025
Skillings.Mack: The Skillings-Mack Test Statistic for Block Designs with Missing Observations (Version 1.10)

 		2013
TensorTools: Multilinear Algebra (Version 1.0.0)

 		2024
TestIndVars: Testing the Independence of Variables for Specific Covariance Structures (Version 0.1.0)

 		2024
VIRF: Computation of Volatility Impulse Response Function of Multivariate Time Series (Version 0.1.1)

 		2019
adass: Adaptive Smoothing Spline (AdaSS) Estimator for the Function-on-Function Linear Regression (Version 1.0.1)

 		2021
alphaci: Confidence Intervals for Coefficient Alpha and Standardized Alpha (Version 1.0.1)

 		2022
exactLTRE: An Exact Method for Life Table Response Experiment (LTRE) Analysis (Version 0.1.2)

 		2022
fglsnet: A Feasible Generalized Least Squares Estimator for Regression Analysis of Outcomes with Network Dependence (Version 1.1)

 		2021
geesmv: Modified Variance Estimators for Generalized Estimating Equations (Version 1.3)

 		2014
glmmEP: Generalized Linear Mixed Model Analysis via Expectation Propagation (Version 1.0-3.1)

 		2018
gorica: Evaluation of Inequality Constrained Hypotheses Using GORICA (Version 0.1.5)

 		2019
locpolExpectile: Local Polynomial Expectile Regression (Version 0.1.1)

 		2021
matsbyname: An Implementation of Matrix Mathematics that Respects Row and Column Names (Version 0.6.13)

 		2019
meerva: Analysis of Data with Measurement Error Using a Validation Subsample (Version 0.2-2)

 		2021
mfaces: Fast Covariance Estimation for Multivariate Sparse Functional Data (Version 0.1-4)

 		2021
momentuHMM: Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models (Version 1.5.8)

 		2017
mvSLOUCH: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses (Version 2.7.7)

 		2013
rTensor2: MultiLinear Algebra (Version 2.0.0)

 		2022
semicontMANOVA: Multivariate ANalysis of VAriance with Ridge Regularization for Semicontinuous High-Dimensional Data (Version 0.2)

 		2024
snpReady: Preparing Genotypic Datasets in Order to Run Genomic Analysis (Version 0.9.6)

 		2017
starvars: Vector Logistic Smooth Transition Models Estimation and Prediction (Version 1.1.10)

 		2020
survivalMPLdc: Penalised Likelihood for Survival Analysis with Dependent Censoring (Version 0.1.1)

 		2020
sasfunclust: Sparse and Smooth Functional Clustering (Version 1.0.0)

 		2021
alphaci Alpha: (Version )

 		0
LFM: Laplace Factor Model Analysis and Evaluation (Version 0.3.3)

 		2024
TFM: Sparse Online Principal Component for Truncated Factor Model (Version 0.5.2)

 		2024
dmlalg: Double Machine Learning Algorithms (Version 1.0.2)

 		2021
relliptical: The Truncated Elliptical Family of Distributions (Version 1.3.0)

 		2021
sdpdth: M-Estimator for Threshold Spatial Dynamic Panel Data Model (Version 0.2)

 		2021
SLBDD: Statistical Learning for Big Dependent Data (Version 0.0.4)

 		2021
heterocop: Semi-Parametric Estimation with Gaussian Copula (Version 1.0.0)

 		2024
CoFM: Copula Factor Models (Version 1.1.4)

 		2026
CoSMoS: Complete Stochastic Modelling Solution (Version 2.1.1)

 		2019
CommKern: Network-Based Communities and Kernel Machine Methods (Version 1.0.1)

 		2022
DCEM Algorithm: (Version )

 		0
bgsmtr: Bayesian Group Sparse Multi-Task Regression (Version 0.7)

 		2016
face: Fast Covariance Estimation for Sparse Functional Data (Version 0.1-8)

 		2016
AGPRIS: AGricultural PRoductivity in Space (Version 2.0)

 		2020
BANAM: Bayesian Analysis of the Network Autocorrelation Model (Version 0.2.2)

 		2024
BEDASSLE Differentiation: (Version )

 		0
BSTFA: Bayesian Spatio-Temporal Factor Analysis Model (Version 0.1.0)

 		2025
BSTZINB: Association Among Disease Counts and Socio-Environmental Factors (Version 2.0.1)

 		2024
BayesSampling: Bayes Linear Estimators for Finite Population (Version 1.1.0)

 		2020
Bergm: Bayesian Exponential Random Graph Models (Version 5.0.7)

 		2009
CDatanet: Econometrics of Network Data (Version 2.2.2)

 		2021
CFM: Analyzing Censored Factor Models (Version 0.8.0)

 		2025
DLFM: Distributed Laplace Factor Model (Version 0.2.2)

 		2025
DSFM: Distributed Skew Factor Model Estimation Methods (Version 1.0.1)

 		2025
DemoKin: Estimate Population Kin Distribution (Version 1.0.3)

 		2023
DiSSMod: Fitting Sample Selection Models for Discrete Response Variables (Version 1.0.0)

 		2019
EFM: Elliptical Factor Models (Version 1.3.0)

 		2025
EMC2: Bayesian Hierarchical Analysis of Cognitive Models of Choice (Version 3.4.1)

 		2024
EcoEnsemble: A General Framework for Combining Ecosystem Models (Version 1.1.2)

 		2022
FPCdpca Analysis: (Version )

 		0
FamEvent: Family Age-at-Onset Data Simulation and Penetrance Estimation (Version 3.2)

 		2016
GNAR: Methods for Fitting Network Time Series Models (Version 1.1.4)

 		2018
GenHMM1d Models: (Version )

 		0
GenMarkov: Multivariate Markov Chains (Version 0.2.1)

 		2021
HiGarrote Relationships: (Version )

 		0
ICsurv: Semiparametric Regression Analysis of Interval-Censored Data (Version 1.0.1)

 		2014
Kurt: Performs Kurtosis-Based Statistical Analyses (Version 1.1)

 		2020
MMeM: Multivariate Mixed Effects Model (Version 0.1.1)

 		2019
MarkowitzR: Statistical Significance of the Markowitz Portfolio (Version 1.0.3)

 		2014
NRejections: Metrics for Multiple Testing with Correlated Outcomes (Version 1.2.0)

 		2018
OEFPIL Linearization: (Version )

 		0
Opt5PL: Optimal Designs for the 5-Parameter Logistic Model (Version 0.1.1)

 		2018
OptimalDesign: A Toolbox for Computing Efficient Designs of Experiments (Version 1.0.3)

 		2016
PROreg: Patient Reported Outcomes Regression Analysis (Version 1.3.2)

 		2017
RESIDE: Rapid Easy Synthesis to Inform Data Extraction (Version 0.3.2)

 		2024
RMark: R Code for Mark Analysis (Version 3.0.6)

 		2011
RRRR: Online Robust Reduced-Rank Regression Estimation (Version 1.1.1)

 		2020
Renvlp: Computing Envelope Estimators (Version 3.4.5)

 		2018
RobinCar Trials: (Version )

 		0
SFM: A Package for Analyzing Skew Factor Models (Version 0.2.1)

 		2024
SIRE Significance: (Version )

 		0
SMLE: Joint Feature Screening via Sparse MLE (Version 2.2-3)

 		2020
SharpeR: Statistical Significance of the Sharpe Ratio (Version 1.4.0)

 		2013
SimTOST Simulation: (Version )

 		0
Skillings.Mack Observations: (Version )

 		0
StructureMC: Structured Matrix Completion (Version 1.0)

 		2019
TCA: Tensor Composition Analysis (Version 1.2.1)

 		2019
TestIndVars Structures: (Version )

 		0
Unico: Unified Cross-Omics Deconvolution (Version 0.1.0)

 		2024
ZIDW: Zero-Inflated Discrete Weibull Models (Version 0.1.0)

 		2025
aIc: Testing for Compositional Pathologies in Datasets (Version 1.0)

 		2022
adnuts: No-U-Turn MCMC Sampling for 'ADMB' Models (Version 1.1.2)

 		2018
ahnr: An Implementation of the Artificial Hydrocarbon Networks (Version 0.3.1)

 		2017
backShift: Learning Causal Cyclic Graphs from Unknown Shift Interventions (Version 0.1.4.3)

 		2015
bspcov: Bayesian Sparse Estimation of a Covariance Matrix (Version 1.0.3)

 		2024
cSEM: Composite-Based Structural Equation Modeling (Version 0.6.1)

 		2020
cheem: Interactively Explore Local Explanations with the Radial Tour (Version 0.4.2)

 		2022
decp: Complete Change Point Analysis (Version 0.1.2)

 		2024
depCensoring: Statistical Methods for Survival Data with Dependent Censoring (Version 0.1.8)

 		2024
discSurv: Discrete Time Survival Analysis (Version 2.0.0)

 		2015
do3PCA: Probabilistic Phylogenetic Principal Component Analysis (Version 1.0.0)

 		2024
dualScale: Dual Scaling Analysis of Data (Version 1.0.0)

 		2014
estimateW: Estimation of Spatial Weight Matrices (Version 0.1.0)

 		2022
exactLTRE Analysis: (Version )

 		0
frailtypack: Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints (Version 3.8.0)

 		2005
freqdom: Frequency Domain Based Analysis: Dynamic PCA (Version 2.0.5)

 		2015
geesmv Equations: (Version )

 		0
genpathmox: Pathmox Approach Segmentation Tree Analysis (Version 1.1)

 		2014
geommc: Geometric Markov Chain Sampling (Version 0.1.1)

 		2024
glmmEP Propagation: (Version )

 		0
graphsim: Simulate Expression Data from 'igraph' Networks (Version 1.0.4)

 		2020
isni: Index of Local Sensitivity to Nonignorability (Version 1.3)

 		2018
jewel: Graphical Models Estimation from Multiple Sources (Version 2.0.2)

 		2023
lmmpar: Parallel Linear Mixed Model (Version 0.1.0)

 		2017
madness: Automatic Differentiation of Multivariate Operations (Version 0.2.8)

 		2015
mars: Meta Analysis and Research Synthesis (Version 0.2.2)

 		2025
matrixNormal: The Matrix Normal Distribution (Version 0.1.1)

 		2018
meerva Subsample: (Version )

 		0
metaSEM: Meta-Analysis using Structural Equation Modeling (Version 1.5.0)

 		2015
mfaces Data: (Version )

 		0
mro: Multiple Correlation (Version 0.1.1)

 		2017
multilevelmediation: Utility Functions for Multilevel Mediation Analysis (Version 0.4.1)

 		2024
nparMD: Nonparametric Analysis of Multivariate Data in Factorial Designs (Version 0.2.3)

 		2018
orderanalyzer: Extracting Order Position Tables from PDF-Based Order Documents (Version 1.0.1)

 		2024
panelvar: Panel Vector Autoregression (Version 0.5.6)

 		2018
pmlsp: Partial Maximum Likelihood Estimation of Spatial Probit Models (Version 1.0.1)

 		2026
psborrow2: Bayesian Dynamic Borrowing Analysis and Simulation (Version 0.0.4.0)

 		2024
ptmixed: Poisson-Tweedie Generalized Linear Mixed Model (Version 1.1.3)

 		2019
qape: Quantile of Absolute Prediction Errors (Version 2.1)

 		2020
quadmatrix: Solving Quadratic Matrix Equations (Version 0.1.0)

 		2018
refreg: Conditional Multivariate Reference Regions (Version 0.1.1)

 		2021
retel: Regularized Exponentially Tilted Empirical Likelihood (Version 0.1.1)

 		2024
rodd: Optimal Discriminating Designs (Version 0.2-1)

 		2014
rrMixture: Reduced-Rank Mixture Models (Version 0.1-2)

 		2022
shrinkem: Approximate Bayesian Regularization for Parsimonious Estimates (Version 0.2.0)

 		2024
sim2Dpredictr: Simulate Outcomes Using Spatially Dependent Design Matrices (Version 0.1.1)

 		2020
skewMLRM: Estimation for Scale-Shape Mixtures of Skew-Normal Distributions (Version 1.7)

 		2021
skewlmm: Scale Mixture of Skew-Normal Linear Mixed Models (Version 1.1.3)

 		2020
slasso: S-LASSO Estimator for the Function-on-Function Linear Regression (Version 1.0.1)

 		2021
stablespec: Stable Specification Search in Structural Equation Models (Version 0.3.0)

 		2016
starvars Prediction: (Version )

 		0
success: Survival Control Charts Estimation Software (Version 1.1.1)

 		2022
survivalMPLdc Censoring: (Version )

 		0
winputall: Variable Input Allocation Among Crops (Version 1.0.1)

 		2024

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