R Package Scholar
27,072

pbapply: Adding Progress Bar to '*apply' Functions

Peter Solymos  Zygmunt Zawadzki  Henrik Bengtsson  R Core Team   View description and downloadsView dependenciesGitHub project

2010 Published
1.7-2 Version
0 Citations
4 Authors
Referenced by ⇅ Year
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ElliptCopulas: Inference of Elliptical Distributions and Copulas (Version 0.1.4.1)

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GenomeAdmixR: Simulate Admixture of Genomes (Version 2.1.7)

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HeritSeq: Heritability of Gene Expression for Next-Generation Sequencing (Version 1.0.2)

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IDF: Estimation and Plotting of IDF Curves (Version 2.1.2)

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ILSE: Linear Regression Based on 'ILSE' for Missing Data (Version 1.1.7)

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Infusion: Inference Using Simulation (Version 2.2.0)

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LMMstar: Repeated Measurement Models for Discrete Times (Version 1.1.0)

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LexisNexisTools: Working with Files from 'LexisNexis' (Version 1.0.0)

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MACER: Molecular Acquisition, Cleaning, and Evaluation in R 'MACER' (Version 0.2.1)

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MMDCopula: Robust Estimation of Copulas by Maximum Mean Discrepancy (Version 0.2.1)

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MOCHA: Modeling for Single-Cell Open Chromatin Analysis (Version 1.1.0)

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MRFcov: Markov Random Fields with Additional Covariates (Version 1.0.39)

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MSEtool: Management Strategy Evaluation Toolkit (Version 3.7.2)

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MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis (Version 0.10.1)

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MorphoRegions: Analysis of Regionalization Patterns in Serially Homologous Structures (Version 0.1.0)

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MortalityGaps: The Double-Gap Life Expectancy Forecasting Model (Version 1.0.0)

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MortalityLaws: Parametric Mortality Models, Life Tables and HMD (Version 2.1.0)

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NetworkToolbox: Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis (Version 1.4.2)

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OSMscale: Add a Scale Bar to 'OpenStreetMap' Plots (Version 0.5.20)

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PRDA: Conduct a Prospective or Retrospective Design Analysis (Version 1.0.0)

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PRECAST: Embedding and Clustering with Alignment for Spatial Datasets (Version 1.6.5)

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ProFAST: Probabilistic Factor Analysis for Spatially-Aware Dimension Reduction (Version 1.4)

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RGCCA: Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data (Version 3.0.3)

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RandomForestsGLS: Random Forests for Dependent Data (Version 0.1.5)

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SCORPION: Single Cell Oriented Reconstruction of PANDA Individual Optimized Networks (Version 1.0.2)

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SCORPIUS: Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data (Version 1.0.9)

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SEMgraph: Network Analysis and Causal Inference Through Structural Equation Modeling (Version 1.2.2)

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SemNeT: Methods and Measures for Semantic Network Analysis (Version 1.4.4)

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Seurat: Tools for Single Cell Genomics (Version 5.1.0)

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Signac: Analysis of Single-Cell Chromatin Data (Version 1.14.0)

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SmCCNet: Sparse Multiple Canonical Correlation Network Analysis Tool (Version 2.0.3)

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TIGERr: Technical Variation Elimination with Ensemble Learning Architecture (Version 1.0.0)

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Unico: Unified Cross-Omics Deconvolution (Version 0.1.0)

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2022
VecDep: Measuring Copula-Based Dependence Between Random Vectors (Version 0.1.3)

0
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activity: Animal Activity Statistics (Version 1.3.4)

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animl: A Collection of ML Tools for Conservation Research (Version 1.1.0)

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antaresEditObject: Edit an 'Antares' Simulation (Version 0.7.1)

2018
antaresRead: Import, Manipulate and Explore the Results of an 'Antares' Simulation (Version 2.7.2)

2017
bSims: Agent-Based Bird Point Count Simulator (Version 0.3-2)

2019
basemaps: Accessing Spatial Basemaps in R (Version 0.0.8)

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bayesassurance: Bayesian Assurance Computation (Version 0.1.0)

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bbreg: Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data (Version 2.0.2)

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betaselectr: Betas-Select in Structural Equation Models and Linear Models (Version 0.1.0)

0
blackbox: Black Box Optimization and Exploration of Parameter Space (Version 1.1.46)

2016
bootnet: Bootstrap Methods for Various Network Estimation Routines (Version 1.6)

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clarify: Simulation-Based Inference for Regression Models (Version 0.2.1)

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cleangeo: Cleaning Geometries from Spatial Objects (Version 0.3-1)

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conformalInference.fd: Tools for Conformal Inference for Regression in Multivariate Functional Setting (Version 1.1.1)

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corpustools: Managing, Querying and Analyzing Tokenized Text (Version 0.5.1)

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corto: Inference of Gene Regulatory Networks (Version 1.2.4)

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crossurr: Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers (Version 1.1.1)

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curvir: Specify Reserve Demand Curves (Version 0.1.1)

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ddecompose: Detailed Distributional Decomposition (Version 1.0.0)

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densitr: Analysing Density Profiles from Resistance Drilling of Trees (Version 0.2)

2020
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did: Treatment Effects with Multiple Periods and Groups (Version 2.1.2)

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disto: Unified Interface to Distance, Dissimilarity, Similarity Matrices (Version 0.2.0)

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dsims: Distance Sampling Simulations (Version 1.0.4)

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dvir: Disaster Victim Identification (Version 3.3.0)

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dyngen: A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses (Version 1.0.5)

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eRTG3D: Empirically Informed Random Trajectory Generation in 3-D (Version 0.7.0)

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embryogrowth: Tools to Analyze the Thermal Reaction Norm of Embryo Growth (Version 9.5)

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epiphy: Analysis of Plant Disease Epidemics (Version 0.5.0)

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epm: EcoPhyloMapper (Version 1.1.3)

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extremeStat: Extreme Value Statistics and Quantile Estimation (Version 1.5.9)

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eyetools: Analyse Eye Data (Version 0.7.2)

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eyetrackingR: Eye-Tracking Data Analysis (Version 0.2.1)

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flipr: Flexible Inference via Permutations in R (Version 0.3.3)

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funStatTest: Statistical Testing for Functional Data (Version 1.0.3)

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fwb: Fractional Weighted Bootstrap (Version 0.2.0)

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gcite: Google Citation Parser (Version 0.10.1)

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gdm: Generalized Dissimilarity Modeling (Version 1.6.0-3)

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glmmSeq: General Linear Mixed Models for Gene-Level Differential Expression (Version 0.5.5)

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hypervolume: High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls (Version 3.1.4)

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2023
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2018
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2020
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2021
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2018
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2011
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2014
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2022
mixpoissonreg: Mixed Poisson Regression for Overdispersed Count Data (Version 1.0.0)

2021
mldr.resampling: Resampling Algorithms for Multi-Label Datasets (Version 0.2.3)

2023
mobr: Measurement of Biodiversity (Version 3.0.0)

2020
modelbpp: Model BIC Posterior Probability (Version 0.1.5)

2023
modnets: Modeling Moderated Networks (Version 0.9.0)

2021
mvDFA: Multivariate Detrended Fluctuation Analysis (Version 0.0.4)

2023
mvgam: Multivariate (Dynamic) Generalized Additive Models (Version 1.1.3)

2024
neonUtilities: Utilities for Working with NEON Data (Version 2.4.2)

2018
nestedcv: Nested Cross-Validation with 'glmnet' and 'caret' (Version 0.7.10)

2022
nettskjemar: Connect to the 'nettskjema.no' API of the University of Oslo (Version 0.1.4)

2021
ngspatial: Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data (Version 1.2-2)

2012
nhdplusTools: NHDPlus Tools (Version 1.2.1)

2019
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2021
ontoFAST: Interactive Annotation of Characters with Biological Ontologies (Version 1.0.0)

2021
opticut: Likelihood Based Optimal Partitioning and Indicator Species Analysis (Version 0.1-3)

2016
palaeoverse: Prepare and Explore Data for Palaeobiological Analyses (Version 1.4.0)

2022
parSim: Parallel Simulation Studies (Version 0.1.5)

2017
partR2: Partitioning R2 in GLMMs (Version 0.9.2)

2021
pct: Propensity to Cycle Tool (Version 0.9.9)

2019
phenology: Tools to Manage a Parametric Function that Describes Phenology and More (Version 10.1)

2012
pmcalibration: Calibration Curves for Clinical Prediction Models (Version 0.1.0)

2023
polmineR: Verbs and Nouns for Corpus Analysis (Version 0.8.9)

2016
portfolioBacktest: Automated Backtesting of Portfolios over Multiple Datasets (Version 0.4.1)

2019
powerNLSEM: Simulation-Based Power Estimation (MSPE) for Nonlinear SEM (Version 0.1.2)

2024
predictNMB: Evaluate Clinical Prediction Models by Net Monetary Benefit (Version 0.2.1)

2023
predictionInterval: Prediction Interval Functions for Assessing Replication Study Results (Version 1.0.0)

2016
psychonetrics: Structural Equation Modeling and Confirmatory Network Analysis (Version 0.13)

2019
qsub: Running Commands Remotely on 'Gridengine' Clusters (Version 1.1.3)

2018
qte: Quantile Treatment Effects (Version 1.3.1)

2015
rPanglaoDB: Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB Database (Version 0.2.1)

2021
racademyocean: Client for 'AcademyOcean API' (Version 0.3.3)

2021
raceland: Pattern-Based Zoneless Method for Analysis and Visualization of Racial Topography (Version 1.2.1)

2019
ractivecampaign: Loading Data from 'ActiveCampaign API v3' (Version 0.2.0)

2021
rangeBuilder: Occurrence Filtering, Geographic Standardization and Generation of Species Range Polygons (Version 2.2)

2016
rdwd: Select and Download Climate Data from 'DWD' (German Weather Service) (Version 1.8.0)

2017
registr: Curve Registration for Exponential Family Functional Data (Version 2.1.0)

2020
retriever: Generate Disease-Specific Response Signatures from the LINCS-L1000 Data (Version 0.2.1)

2021
rfacebookstat: Load Data from Facebook API Marketing (Version 2.11.0)

2018
rgoogleads: Loading Data from 'Google Ads API' (Version 0.11.0)

2021
ri2: Randomization Inference for Randomized Experiments (Version 0.4.0)

2018
rifreg: Estimate Recentered Influence Function Regression (Version 0.1.0)

2024
rlinkedinads: Load Data from 'Linkedin Advertising API' (Version 0.2.0)

2023
rnaturalearth: World Map Data from Natural Earth (Version 1.0.1)

2017
rphylopic: Get Silhouettes of Organisms from PhyloPic (Version 1.5.0)

2018
rptR: Repeatability Estimation for Gaussian and Non-Gaussian Data (Version 0.9.22)

2016
rytstat: Work with 'YouTube API' (Version 0.3.2)

2021
sNPLS: NPLS Regression with L1 Penalization (Version 1.0.27)

2016
saeRobust: Robust Small Area Estimation (Version 0.5.0)

2016
scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing (Version 2.1.2)

2022
scMappR: Single Cell Mapper (Version 1.0.11)

2020
scTenifoldKnk: In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks (Version 1.0.1)

2020
scTenifoldNet: Construct and Compare scGRN from Single-Cell Transcriptomic Data (Version 1.3)

2019
semlbci: Likelihood-Based Confidence Interval in Structural Equation Models (Version 0.11.2)

2023
semlrtp: Likelihood Ratio Test P-Values for Structural Equation Models (Version 0.1.1)

2024
sf: Simple Features for R (Version 1.0-19)

2016
sim.BA: Simulation-Based Bias Analysis for Observational Studies (Version 0.1.0)

2024
sirt: Supplementary Item Response Theory Models (Version 4.1-15)

2013
sklarsomega: Measuring Agreement Using Sklar's Omega Coefficient (Version 3.0-2)

2018
slimrec: Sparse Linear Method to Predict Ratings and Top-N Recommendations (Version 0.1.0)

2017
smacpod: Statistical Methods for the Analysis of Case-Control Point Data (Version 2.6.4)

2014
smerc: Statistical Methods for Regional Counts (Version 1.8.4)

2015
sonicscrewdriver: Bioacoustic Analysis and Publication Tools (Version 0.0.7)

2019
spaMM: Mixed-Effect Models, with or without Spatial Random Effects (Version 4.5.0)

2013
speccurvieR: Easy, Fast, and Pretty Specification Curve Analysis (Version 0.4.2)

2023
spectral: Common Methods of Spectral Data Analysis (Version 2.0)

2016
sstvars: Toolkit for Reduced Form and Structural Smooth Transition Vector Autoregressive Models (Version 1.0.1)

2024
stars: Spatiotemporal Arrays, Raster and Vector Data Cubes (Version 0.6-7)

2018
stplanr: Sustainable Transport Planning (Version 1.2.2)

2015
strap: Stratigraphic Tree Analysis for Palaeontology (Version 1.6-1)

2014
success: Survival Control Charts Estimation Software (Version 1.1.0)

2022
svars: Data-Driven Identification of SVAR Models (Version 1.3.11)

2017
swaRmverse: Swarm Space Creation (Version 0.1.1)

2024
textpress: A Lightweight and Versatile NLP Toolkit (Version 1.0.0)

2024
transforEmotion: Sentiment Analysis for Text, Image and Video using Transformer Models (Version 0.1.5)

2022
twosigma: DE Analysis for Single-Cell RNA-Sequencing Data (Version 1.0.2)

2021
uGMAR: Estimate Univariate Gaussian and Student's t Mixture Autoregressive Models (Version 3.5.0)

2017
ubms: Bayesian Models for Data from Unmarked Animals using 'Stan' (Version 1.2.7)

2021
uci: Urban Centrality Index (Version 0.3.0)

2023
ungroup: Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data (Version 1.4.4)

2018
unmarked: Models for Data from Unmarked Animals (Version 1.4.3)

2010
varycoef: Modeling Spatially Varying Coefficients (Version 0.3.4)

2019
vesselr: Gradient and Vesselness Tools for Arrays and NIfTI Images (Version 0.2.1)

2017
warbleR: Streamline Bioacoustic Analysis (Version 1.1.32)

2015
wosr: Clients to the 'Web of Science' and 'InCites' APIs (Version 0.3.0)

2018
wqspt: Permutation Test for Weighted Quantile Sum Regression (Version 1.0.1)

2023
zebu: Local Association Measures (Version 0.2.2.0)

2016
zoomGroupStats: Analyze Text, Audio, and Video from 'Zoom' Meetings (Version 0.1.0)

2021

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