R Package Scholar
26,621
Referenced by ⇅ Year
bnClustOmics: Bayesian Network-Based Clustering of Multi-Omics Data (Version 1.1.1)

2022
convexjlr: Disciplined Convex Programming in R using "Convex.jl" (Version 0.8.1)

2017
diveRsity: A Comprehensive, General Purpose Population Genetics Analysis Package (Version 1.9.90)

2012
FactorsR: Identification of the Factors Affecting Species Richness (Version 1.5)

2017
graphx: Graphics Routines for Scientific Research (Version 1.0)

2022
Inflect: Melt Curve Fitting and Melt Shift Analysis (Version 1.1.0)

2021
maptools: Tools for Handling Spatial Objects (Version 1.1-8)

2003
pacviz: Pac-Man Visualization Package (Version 1.0.3)

2021
plotKML: Visualization of Spatial and Spatio-Temporal Objects in Google Earth (Version 0.8-3)

2012
pspline.inference: Estimation of Characteristics of Seasonal and Sporadic Infectious Disease Outbreaks Using Generalized Additive Modeling with Penalized Basis Splines (Version 1.0.4)

2020
SitesInterest: Inferring an Animal"s Sites of Interest from High Resolution Data (Version 1.0)

2018
touchard: Touchard Model and Regression (Version 2.0.1)

2018
bdvis: Biodiversity Data Visualizations (Version 0.2.37)

2014
MatrixCorrelation: Matrix Correlation Coefficients (Version 0.10.0)

2016
ei: Ecological Inference (Version 1.3-3)

2016
epade: Easy Plots (Version 0.5.1)

2011
epimdr: Functions and Data for "Epidemics: Models and Data in R" (Version 0.6-5)

2018
epimdr2: Functions and Data for "Epidemics: Models and Data in R (2nd Edition)" (Version 1.0-9)

2022
ABCanalysis: Computed ABC Analysis (Version 1.2.1)

2015
AcuityView: A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity (Version 0.1)

2017
AnthropMMD: An R Package for the Mean Measure of Divergence (MMD) (Version 4.0.3)

2013
Anthropometry: Statistical Methods for Anthropometric Data (Version 1.19)

2014
Apollonius: 2D Apollonius Graphs (Version 1.0.1)

2023
Autoplotprotein: Development of Visualization Tools for Protein Sequence (Version 1.1)

2017
BCEA: Bayesian Cost Effectiveness Analysis (Version 2.4.6)

2012
BHAI: Estimate the Burden of Healthcare-Associated Infections (Version 0.99.2)

2019
BioVenn: Create Area-Proportional Venn Diagrams from Biological Lists (Version 1.1.3)

2020
Biostatistics: Statistics Tutorials for Biologists (Version 1.0.4)

2021
BoSSA: A Bunch of Structure and Sequence Analysis (Version 3.7)

2009
CORElearn: Classification, Regression and Feature Evaluation (Version 1.57.3)

2009
CSHShydRology: Canadian Hydrological Analyses (Version 1.4.2)

2022
DIDmultiplegt: Estimators DID with Multiple Groups and Periods (Version 2.0.0)

2020
DIFtree: Item Focussed Trees for the Identification of Items in Differential Item Functioning (Version 3.1.6)

2015
DataVisualizations: Visualizations of High-Dimensional Data (Version 1.3.2)

2018
DatabionicSwarm: Swarm Intelligence for Self-Organized Clustering (Version 2.0.0)

2017
EcoIndR: Ecological Indicators (Version 2.0)

2017
FSA: Simple Fisheries Stock Assessment Methods (Version 0.9.5)

2015
GFD: Tests for General Factorial Designs (Version 0.3.3)

2015
GeoModels: Procedures for Gaussian and Non Gaussian Geostatistical (Large) Data Analysis (Version 2.0.7)

2022
GridOnClusters: Cluster-Preserving Multivariate Joint Grid Discretization (Version 0.1.0.1)

2020
HDSpatialScan: Multivariate and Functional Spatial Scan Statistics (Version 1.0.4)

2021
HTSCluster: Clustering High-Throughput Transcriptome Sequencing (HTS) Data (Version 2.0.11)

2011
InflectSSP: Melt Curve Fitting and Melt Shift Analysis (Version 1.6)

2021
IsotopeR: Stable Isotope Mixing Model (Version 0.5.4)

2011
KernSmoothIRT: Nonparametric Item Response Theory (Version 6.4)

2011
KnowBR: Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases (Version 2.2)

2017
LBSPR: Length-Based Spawning Potential Ratio (Version 0.1.6)

2016
LW1949: An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949) (Version 1.1.0)

2015
LearnPCA: Functions, Data Sets and Vignettes to Aid in Learning Principal Components Analysis (PCA) (Version 0.3.4)

2022
LinkageMapView: Plot Linkage Group Maps with Quantitative Trait Loci (Version 2.1.2)

2017
MANOVA.RM: Resampling-Based Analysis of Multivariate Data and Repeated Measures Designs (Version 0.5.4)

2016
MSG: Data and Functions for the Book Modern Statistical Graphics (Version 0.8)

2011
MVQuickGraphs: Quick Multivariate Graphs (Version 0.1.2)

2020
MultiBD: Multivariate Birth-Death Processes (Version 0.2.0)

2016
NMADiagT: Network Meta-Analysis of Multiple Diagnostic Tests (Version 0.1.2)

2020
NPCirc: Nonparametric Circular Methods (Version 3.1.1)

2013
OptCirClust: Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible (Version 0.0.4)

2020
Orcs: Omnidirectional R Code Snippets (Version 1.2.3)

2018
OrigamiPlot: A Visualization Tool Enhancing Radar Plot Visualizations for Multivariate Data (Version 0.1.0)

2024
PReMiuM: Dirichlet Process Bayesian Clustering, Profile Regression (Version 3.2.13)

2013
Patterns: Deciphering Biological Networks with Patterned Heterogeneous Measurements (Version 1.5)

2019
QTE.RD: Quantile Treatment Effects under the Regression Discontinuity Design (Version 1.1.0)

2024
QurvE: Robust and User-Friendly Analysis of Growth and Fluorescence Curves (Version 1.1.1)

2023
RAC: R Package for Aqua Culture (Version 1.5.5)

2016
RHRV: Heart Rate Variability Analysis of ECG Data (Version 5.0.0)

2008
RMark: R Code for Mark Analysis (Version 3.0.0)

2011
RRphylo: Phylogenetic Ridge Regression Methods for Comparative Studies (Version 2.8.1)

2018
Rchoice: Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters (Version 0.3-6)

2014
SPEDInstabR: Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept (Version 2.2)

2016
SeqFeatR: A Tool to Associate FASTA Sequences and Features (Version 0.3.1)

2014
SherlockHolmes: Building a Concordance of Terms in a Series of Texts (Version 1.0.1)

2023
TBFmultinomial: TBF Methodology Extension for Multinomial Outcomes (Version 0.1.3)

2017
TOmicsVis: Transcriptome Visualization Process Scheme (Version 2.0.0)

2023
TSVC: Tree-Structured Modelling of Varying Coefficients (Version 1.5.3)

2018
TestAnaAPP: A 'shiny' App for Test Analysis and Visualization (Version 1.1.1)

2023
TrackReconstruction: Reconstruct Animal Tracks from Magnetometer, Accelerometer, Depth and Optional Speed Data (Version 1.3)

2014
abtest: Bayesian A/B Testing (Version 1.0.1)

2019
airGRteaching: Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) (Version 0.3.3)

2018
aniSNA: Statistical Network Analysis of Animal Social Networks (Version 1.1.1)

2023
archdata: Example Datasets from Archaeological Research (Version 1.2-1)

2014
asbio: A Collection of Statistical Tools for Biologists (Version 1.9-7)

2010
binovisualfields: Depth-Dependent Binocular Visual Fields Simulation (Version 0.1.1)

2020
biplotEZ: EZ-to-Use Biplots (Version 2.1)

2023
bpDir: Boxplots for Directional Data (Version 0.1.2)

2020
car: Companion to Applied Regression (Version 3.1-3)

2001
circlesplot: Visualize Proportions with Circles in a Plot (Version 1.1.0)

2024
cmR: Analysis of Cardiac Magnetic Resonance Images (Version 1.1)

2021
cncaGUI: Canonical Non-Symmetrical Correspondence Analysis in R (Version 1.1)

2011
colocPropTest: Proportional Testing for Colocalisation Analysis (Version 0.9.1)

2024
convoSPAT: Convolution-Based Nonstationary Spatial Modeling (Version 1.2.7)

2015
cooltools: Practical Tools for Scientific Computations and Visualizations (Version 2.4)

2022
corto: Inference of Gene Regulatory Networks (Version 1.2.4)

2019
cricketr: Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru (Version 0.0.26)

2015
dexisensitivity: 'DEXi' Decision Tree Analysis and Visualization (Version 1.0.0)

2024
drc: Analysis of Dose-Response Curves (Version 3.0-1)

2005
dupiR: Bayesian Inference from Count Data using Discrete Uniform Priors (Version 1.2.1)

2013
dwp: Density-Weighted Proportion (Version 1.1)

2022
ecoregime: Analysis of Ecological Dynamic Regimes (Version 0.2.0)

2023
fastLink: Fast Probabilistic Record Linkage with Missing Data (Version 0.6.1)

2017
fragility: Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes (Version 1.5)

2020
gap: Genetic Analysis Package (Version 1.6)

2004
getspres: SPRE Statistics for Exploring Heterogeneity in Meta-Analysis (Version 0.2.0)

2019
gmnl: Multinomial Logit Models with Random Parameters (Version 1.1-3.2)

2015
gyro: Hyperbolic Geometry (Version 1.4.0)

2022
haplotypes: Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony (Version 1.1.3.1)

2015
hisse: Hidden State Speciation and Extinction (Version 2.1.11)

2015
hyperSpec: Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) (Version 0.100.2)

2009
hyperoverlap: Overlap Detection in n-Dimensional Space (Version 1.1.1)

2020
inldata: Collection of Datasets for the USGS-INL Monitoring Networks (Version 1.2.7)

2020
interfr: Interference Color Charts for Polarized Light Microscopy (Version 0.1.0)

2017
knfi: Analysis of Korean National Forest Inventory Database (Version 1.0.0)

2024
lba: Latent Budget Analysis for Compositional Data (Version 2.4.52)

2015
magicaxis: Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support (Version 2.4.5)

2012
marmap: Import, Plot and Analyze Bathymetric and Topographic Data (Version 1.0.10)

2013
mdsOpt: Searching for Optimal MDS Procedure for Metric and Interval-Valued Data (Version 0.7-6)

2017
mobr: Measurement of Biodiversity (Version 3.0.0)

2020
mstherm: Analyze MS/MS Protein Melting Data (Version 0.4.7)

2017
multibiplotGUI: Multibiplot Analysis in R (Version 1.1)

2014
multiblock: Multiblock Data Fusion in Statistics and Machine Learning (Version 0.8.8.2)

2021
mutoss: Unified Multiple Testing Procedures (Version 0.1-13)

2010
mutossGUI: A Graphical User Interface for the MuToss Project (Version 0.1-12)

2010
nnfor: Time Series Forecasting with Neural Networks (Version 0.9.9)

2017
oceanmap: A Plotting Toolbox for 2D Oceanographic Data (Version 0.1.6)

2016
optpart: Optimal Partitioning of Similarity Relations (Version 3.0-3)

2010
pcds: Proximity Catch Digraphs and Their Applications (Version 0.1.8)

2020
pdc: Permutation Distribution Clustering (Version 1.0.3)

2012
pcutils: Some Useful Functions for Statistics and Visualization (Version 0.2.6)

2023
phonR: Tools for Phoneticians and Phonologists (Version 1.0-7)

2012
phytools: Phylogenetic Tools for Comparative Biology (and Other Things) (Version 2.3-0)

2011
plotSEMM: Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models (Version 2.4)

2012
plotmo: Plot a Model's Residuals, Response, and Partial Dependence Plots (Version 3.6.4)

2011
plotprotein: Development of Visualization Tools for Protein Sequence (Version 1.0)

2017
plsRbeta: Partial Least Squares Regression for Beta Regression Models (Version 0.3.0)

2011
poliscidata: Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition (Version 2.3.0)

2016
prepplot: Prepare Figure Region for Base Graphics (Version 1.0-1)

2018
qdap: Bridging the Gap Between Qualitative Data and Quantitative Analysis (Version 2.4.6)

2013
qra: Quantal Response Analysis for Dose-Mortality Data (Version 0.2.7)

2021
randomizeR: Randomization for Clinical Trials (Version 3.0.2)

2015
rasterImage: An Improved Wrapper of image() (Version 0.4.0)

2016
recluster: Ordination Methods for the Analysis of Beta-Diversity Indices (Version 2.9)

2013
regtomean: Regression Toward the Mean (Version 1.1)

2021
rgl: 3D Visualization Using OpenGL (Version 1.3.1)

2004
riskRegression: Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks (Version 2023.12.21)

2011
rjdqa: Quality Assessment for Seasonal Adjustment (Version 0.1.5)

2019
rmcorr: Repeated Measures Correlation (Version 0.7.0)

2016
rminer: Data Mining Classification and Regression Methods (Version 1.4.7)

2011
seasonalityPlot: Seasonality Variation Plots of Stock Prices and Cryptocurrencies (Version 1.3.1)

2021
sensitivity: Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)

2006
shapeR: Collection and Analysis of Otolith Shape Data (Version 1.0-1)

2015
sharp: Stability-enHanced Approaches using Resampling Procedures (Version 1.4.6)

2022
shuffleCI: Confidence Intervals Compared via Shuffling (Version 0.1.0)

2018
simplexreg: Regression Analysis of Proportional Data Using Simplex Distribution (Version 1.3)

2014
simr: Power Analysis for Generalised Linear Mixed Models by Simulation (Version 1.0.7)

2015
skyscapeR: Data Analysis and Visualization for Skyscape Archaeology (Version 1.0.0)

2017
smacofx: Flexible Multidimensional Scaling and 'smacof' Extensions (Version 1.6-1)

2023
smacof: Multidimensional Scaling (Version 2.1-7)

2008
smacpod: Statistical Methods for the Analysis of Case-Control Point Data (Version 2.6)

2014
smallsets: Visual Documentation for Data Preprocessing (Version 2.0.0)

2023
sonicscrewdriver: Bioacoustic Analysis and Publication Tools (Version 0.0.7)

2019
spreval: Evaluation of Sprinkler Irrigation Uniformity and Efficiency (Version 1.1.0)

2021
streamDAG: Analytical Methods for Stream DAGs (Version 1.5)

2023
stressaddition: Modelling Tri-Phasic Concentration-Response Relationships (Version 3.1.0)

2020
surv2sampleComp: Inference for Model-Free Between-Group Parameters for Censored Survival Data (Version 1.0-5)

2013
trajr: Animal Trajectory Analysis (Version 1.5.1)

2018
treePlotArea: Correction Factors for Tree Plot Areas Intersected by Stand Boundaries (Version 2.1.0)

2022
tsutils: Time Series Exploration, Modelling and Forecasting (Version 0.9.4)

2019
tswge: Time Series for Data Science (Version 2.1.0)

2016
vhica: Vertical and Horizontal Inheritance Consistence Analysis (Version 0.2.8)

2016
viralx: Explainers for Regression Models in HIV Research (Version 1.3.0)

2023
viscomplexr: Phase Portraits of Functions in the Complex Number Plane (Version 1.1.1)

2020
visualFields: Statistical Methods for Visual Fields (Version 1.0.5)

2012
wflo: Data Set and Helper Functions for Wind Farm Layout Optimization Problems (Version 1.9)

2020
wiqid: Quick and Dirty Estimates for Wildlife Populations (Version 0.3.3)

2016
xmeta: A Toolbox for Multivariate Meta-Analysis (Version 1.3.2)

2015
yhat: Interpreting Regression Effects (Version 2.0-4)

2009

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