statmod: Statistical Modeling

Canonical link: https://rscholar.com/pkg/statmod

Gordon Smyth Lizhong Chen Yifang Hu Peter Dunn Belinda Phipson Yunshun Chen • View description and downloads View dependencies GitHub project

2003 Published

1.5.0 Version

0 Citations

1 Authors

Referenced by ⇅	Year
ccdf: Distribution-Free Single-Cell Differential Expression Analysis (Version 1.1.4)	2021
CIDER: Meta-Clustering for Single-Cell Data Integration and Evaluation (Version 0.99.1)	2021
hoa: Higher Order Likelihood Inference (Version 2.1.4.1)	2005
JointModel: Semiparametric Joint Models for Longitudinal and Counting Processes (Version 1.0)	2016
MEtest: A Homogeneity Test under the Presence of Measurement Errors (Version 1.1)	2019
BBSSL: Bayesian Bootstrap Spike-and-Slab LASSO (Version 0.1.0)	2021
qgg: Statistical Tools for Quantitative Genetic Analyses (Version 1.1.2)	2019
BT: (Adaptive) Boosting Trees Algorithm (Version 0.4)	2023
BayesianGLasso: Bayesian Graphical Lasso (Version 0.2.0)	2017
CIMPLE: Analysis of Longitudinal Electronic Health Record (EHR) Data with Possibly Informative Observational Time (Version 0.1.0)	0
ChainLadder: Statistical Methods and Models for Claims Reserving in General Insurance (Version 0.2.19)	2007
CondCopulas: Estimation and Inference for Conditional Copula Models (Version 0.1.4.1)	2022
CopulaGAMM: Copula-Based Mixed Regression Models (Version 0.4.1)	2023
CopulaREMADA: Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies (Version 1.7.3)	2015
DAAG: Data Analysis and Graphics Data and Functions (Version 1.25.6)	2003
DGEobj.utils: Differential Gene Expression (DGE) Analysis Utility Toolkit (Version 1.0.6)	2021
DIscBIO: A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics (Version 1.2.2)	2020
Distributacalcul: Probability Distribution Functions (Version 0.4.0)	2020
FER: Financial Engineering in R (Version 0.94)	2021
FRK: Fixed Rank Kriging (Version 2.3.1)	2017
FactorCopula: Factor, Bi-Factor, Second-Order and Factor Tree Copula Models (Version 0.9.3)	2020
FastJM: Semi-Parametric Joint Modeling of Longitudinal and Survival Data (Version 1.4.2)	2022
GPCMlasso: Differential Item Functioning in Generalized Partial Credit Models (Version 0.1-7)	2018
GUniFrac: Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis (Version 1.8)	2012
GlmSimulatoR: Creates Ideal Data for Generalized Linear Models (Version 1.0.0)	2019
HDJM: Penalized High-Dimensional Joint Model (Version 0.1.0)	2023
Hmsc: Hierarchical Model of Species Communities (Version 3.0-13)	2019
JMH: Joint Model of Heterogeneous Repeated Measures and Survival Data (Version 1.0.3)	2023
JSM: Semiparametric Joint Modeling of Survival and Longitudinal Data (Version 1.0.1)	2016
JointFPM: A Parametric Model for Estimating the Mean Number of Events (Version 1.2.1)	2023
LRTesteR: Likelihood Ratio Tests and Confidence Intervals (Version 1.2.1)	2022
MAnorm2: Tools for Normalizing and Comparing ChIP-seq Samples (Version 1.2.2)	2021
MGDrivE2: Mosquito Gene Drive Explorer 2 (Version 2.1.0)	2020
MJMbamlss: Multivariate Joint Models with 'bamlss' (Version 0.1.0)	2023
MSclassifR: Automated Classification of Mass Spectra (Version 0.3.3)	2022
MVR: Mean-Variance Regularization (Version 1.33.0)	2011
MicrobiomeStat: Statistical Methods for Microbiome Compositional Data (Version 1.2)	2021
MultOrdRS: Model Multivariate Ordinal Responses Including Response Styles (Version 0.1-3)	2021
MultisiteMediation: Causal Mediation Analysis in Multisite Trials (Version 0.0.4)	2017
NetRep: Permutation Testing Network Module Preservation Across Datasets (Version 1.2.7)	2016
PCMRS: Model Response Styles in Partial Credit Models (Version 0.1-4)	2017
PCS: Calculate the Probability of Correct Selection (PCS) (Version 1.3)	2012
PJFM: Variational Inference for High-Dimensional Joint Frailty Model (Version 0.1.0)	2024
PanelCount: Random Effects and/or Sample Selection Models for Panel Count Data (Version 2.0.1)	2015
PredPsych: Predictive Approaches in Psychology (Version 0.4)	2017
RISCA: Causal Inference and Prediction in Cohort-Based Analyses (Version 1.0.5)	2019
RVAideMemoire: Testing and Plotting Procedures for Biostatistics (Version 0.9-83-7)	2011
SNSequate: Standard and Nonstandard Statistical Models and Methods for Test Equating (Version 1.3-5)	2012
SSN2: Spatial Modeling on Stream Networks (Version 0.2.1)	2023
SeBR: Semiparametric Bayesian Regression Analysis (Version 1.0.0)	2023
SparseGrid: Sparse grid integration in R (Version 0.8.2)	2011
SubTS: Positive Tempered Stable Distributions and Related Subordinators (Version 1.0)	2023
UPCM: Uncertainty in Partial Credit Models (Version 0.0-3)	2021
VBJM: Variational Inference for Joint Model (Version 0.1.0)	2023
ZIBR: A Zero-Inflated Beta Random Effect Model (Version 1.0.2)	2023
ZINAR1: Simulates ZINAR(1) Model and Estimates Its Parameters Under Frequentist Approach (Version 0.1.0)	2022
abglasso: Adaptive Bayesian Graphical Lasso (Version 0.1.1)	2021
actuaRE: Handling Hierarchically Structured Risk Factors using Random Effects Models (Version 0.1.5)	2023
afex: Analysis of Factorial Experiments (Version 1.4-1)	2012
assessor: Assessment Tools for Regression Models with Discrete and Semicontinuous Outcomes (Version 1.1.0)	2024
bamlss: Bayesian Additive Models for Location, Scale, and Shape (and Beyond) (Version 1.2-5)	2017
bbreg: Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data (Version 2.0.2)	2020
betareg: Beta Regression (Version 3.2-1)	2004
bgsmtr: Bayesian Group Sparse Multi-Task Regression (Version 0.7)	2016
boxcoxmix: Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects (Version 0.46)	2017
bplsr: Bayesian partial least squares regression (Version 1.0.0)	0
brms: Bayesian Regression Models using 'Stan' (Version 2.22.0)	2015
cgam: Constrained Generalized Additive Model (Version 1.21)	2014
ciuupi: Confidence Intervals Utilizing Uncertain Prior Information (Version 1.2.3)	2018
ciuupi2: Kabaila and Giri (2009) Confidence Interval (Version 1.0.1)	2021
cond: Approximate Conditional Inference for Logistic and Loglinear Models (Version 1.2-3.1)	2009
conf: Visualization and Analysis of Statistical Measures of Confidence (Version 1.9.1)	2018
cplm: Compound Poisson Linear Models (Version 0.7-12.1)	2011
csampling: Functions for Conditional Simulation in Regression-Scale Models (Version 1.2-2.1)	2009
ctmm: Continuous-Time Movement Modeling (Version 1.2.0)	2015
ctsem: Continuous Time Structural Equation Modelling (Version 3.10.1)	2015
cuRe: Parametric Cure Model Estimation (Version 1.1.1)	2020
curesurv: Mixture and Non Mixture Parametric Cure Models to Estimate Cure Indicators (Version 0.1.1)	2024
deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference (Version 1.0.2)	2022
dglm: Double Generalized Linear Models (Version 1.8.6)	2005
diffIRT: Diffusion IRT Models for Response and Response Time Data (Version 1.5)	2013
dsm: Density Surface Modelling of Distance Sampling Data (Version 2.3.3)	2012
dwp: Density-Weighted Proportion (Version 1.1)	2022
endogeneity: Recursive Two-Stage Models to Address Endogeneity (Version 2.1.3)	2022
equateIRT: IRT Equating Methods (Version 2.5.1)	2013
equateMultiple: Equating of Multiple Forms (Version 1.1.1)	2017
fitteR: Fit Hundreds of Theoretical Distributions to Empirical Data (Version 0.2.0)	2017
flexCWM: Flexible Cluster-Weighted Modeling (Version 1.92)	2013
flexrsurv: Flexible Relative Survival Analysis (Version 2.0.18)	2016
flexsurv: Flexible Parametric Survival and Multi-State Models (Version 2.3.2)	2011
frailtypack: Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints (Version 3.6.3)	2005
gllvm: Generalized Linear Latent Variable Models (Version 1.4.3)	2017
glmtoolbox: Set of Tools to Data Analysis using Generalized Linear Models (Version 0.1.12)	2021
gmvjoint: Joint Models of Survival and Multivariate Longitudinal Data (Version 0.4.5)	2022
gofedf: Goodness of Fit Tests Based on Empirical Distribution Functions (Version 0.1.0)	2023
greybox: Toolbox for Model Building and Forecasting (Version 2.0.2)	2018
insight: Easy Access to Model Information for Various Model Objects (Version 0.20.5)	2019
irtQ: Unidimensional Item Response Theory Modeling (Version 0.2.1)	2023
jmdem: Fitting Joint Mean and Dispersion Effects Models (Version 1.0.1)	2018
joineR: Joint Modelling of Repeated Measurements and Time-to-Event Data (Version 1.2.8)	2012
lacm: Latent Autoregressive Count Models (Version 0.1.1)	2018
lme4: Linear Mixed-Effects Models using 'Eigen' and S4 (Version 1.1-35.5)	2003
lmeresampler: Bootstrap Methods for Nested Linear Mixed-Effects Models (Version 0.2.4)	2016
marg: Approximate Marginal Inference for Regression-Scale Models (Version 1.2-2.1)	2009
marp: Model-Averaged Renewal Process (Version 0.1.0)	2022
merlin: Mixed Effects Regression for Linear, Non-Linear and User-Defined Models (Version 0.1.0)	2018
mexhaz: Mixed Effect Excess Hazard Models (Version 2.6)	2016
mgss: A Matrix-Free Multigrid Preconditioner for Spline Smoothing (Version 1.2)	2021
mig: Multivariate Inverse Gaussian Distribution (Version 1.0)	2024
mixcat: Mixed Effects Cumulative Link and Logistic Regression Models (Version 1.0-4)	2011
mixpoissonreg: Mixed Poisson Regression for Overdispersed Count Data (Version 1.0.0)	2021
mlogit: Multinomial Logit Models (Version 1.1-1)	2008
multIntTestFunc: Provides Test Functions for Multivariate Integration (Version 0.3.0)	2021
multimark: Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks (Version 2.1.6)	2015
mvQuad: Methods for Multivariate Quadrature (Version 1.0-8)	2015
mvabund: Statistical Methods for Analysing Multivariate Abundance Data (Version 4.2.1)	2010
nlmm: Generalized Laplace Mixed-Effects Models (Version 1.1.0)	2020
nlreg: Higher Order Inference for Nonlinear Heteroscedastic Models (Version 1.2-2.2)	2009
npmlreg: Nonparametric Maximum Likelihood Estimation for Random Effect Models (Version 0.46-5)	2006
npreg: Nonparametric Regression via Smoothing Splines (Version 1.1.0)	2019
penalizedSVM: Feature Selection SVM using Penalty Functions (Version 1.1.4)	2009
pglm: Panel Generalized Linear Models (Version 0.2-3)	2010
plink: IRT Separate Calibration Linking Methods (Version 1.5-1)	2007
plm: Linear Models for Panel Data (Version 2.6-4)	2006
polyCub: Cubature over Polygonal Domains (Version 0.9.1)	2013
proclhmm: Latent Hidden Markov Models for Response Process Data (Version 1.0.0)	2024
promor: Proteomics Data Analysis and Modeling Tools (Version 0.2.1)	2022
regDIF: Regularized Differential Item Functioning (Version 1.1.1)	2021
rlcv: Robust Likelihood Cross Validation Bandwidth Selection (Version 1.0.0)	2022
robnptests: Robust Nonparametric Two-Sample Tests for Location/Scale (Version 1.1.0)	2021
seeds: Estimate Hidden Inputs using the Dynamic Elastic Net (Version 0.9.1)	2020
smooth: Forecasting Using State Space Models (Version 4.1.0)	2016
spmodel: Spatial Statistical Modeling and Prediction (Version 0.9.0)	2022
ssrm.logmer: Sample Size Determination for Longitudinal Designs with Binary Outcome (Version 0.1)	2018
survPen: Multidimensional Penalized Splines for Survival and Net Survival Models (Version 1.6.0)	2019
survsim: Simulation of Simple and Complex Survival Data (Version 1.1.8)	2013
transmdl: Semiparametric Transformation Models (Version 0.1.0)	2021
tweedie: Evaluation of Tweedie Exponential Family Models (Version 2.3.5)	2004
x.ent: eXtraction of ENTity (Version 1.1.7)	2015
xhaz: Excess Hazard Modelling Considering Inappropriate Mortality Rates (Version 2.0.2)	2022
yuima: The YUIMA Project Package for SDEs (Version 1.15.27)	2014

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