Referenced by ⇅
Year
bastah : Big Data Statistical Analysis for High-Dimensional Models (Version 1.0.7)
2016
biosurvey : Tools for Biological Survey Planning (Version 0.1.1)
2021
BMTME : Bayesian Multi-Trait Multi-Environment for Genomic Selection
Analysis (Version 1.0.19)
2019
bnspatial : Spatial Implementation of Bayesian Networks and Mapping (Version 1.1.1)
2016
ccdf : Distribution-Free Single-Cell Differential Expression Analysis (Version 1.1.4)
2021
CENFA : Climate and Ecological Niche Factor Analysis (Version 1.1.1)
2018
censusxy : Access the U.S. Census Bureau"s Geocoding A.P.I. System (Version 1.1.1)
2019
chickn : "Compressive" Hierarchical Kernel Clustering Toolbox (Version 1.2.3)
2020
CIDER : Meta-Clustering for Single-Cell Data Integration and Evaluation (Version 0.99.1)
2021
clustDRM : Clustering Dose-Response Curves and Fitting Appropriate Models
to Them (Version 0.1-0)
2019
clusterPower : Power Calculations for Cluster-Randomized and Cluster-Randomized
Crossover Trials (Version 0.7.0)
2011
ConR : Computation of Parameters Used in Preliminary Assessment of
Conservation Status (Version 1.3.0)
2016
DCD : Differential Community Detection in Paired Biological Networks (Version 0.1.0)
2017
dcGOR : Analysis of Ontologies and Protein Domain Annotations (Version 1.0.6)
2014
DistributionFitR : Fitting Multiple Parametric Distributions (Version 0.1)
2020
dnet : Integrative Analysis of Omics Data in Terms of Network,
Evolution and Ontology (Version 1.1.7)
2014
dtwSat : Time-Weighted Dynamic Time Warping for Satellite Image Time
Series Analysis (Version 1.0.0)
2015
GWPR.light : Geographically Weighted Panel Regression (Version 0.2.1)
2021
HDtest : High Dimensional Hypothesis Testing for Mean Vectors, Covariance
Matrices, and White Noise of Vector Time Series (Version 2.1)
2016
hsdar : Manage, Analyse and Simulate Hyperspectral Data (Version 1.0.4)
2015
hybridEnsemble : Build, Deploy and Evaluate Hybrid Ensembles (Version 1.7.9)
2013
idmTPreg : Regression Model for Progressive Illness Death Data (Version 1.1)
2017
IFAA : Robust Inference for Absolute Abundance in Microbiome Analysis (Version 1.1.2)
2020
ino : Initialization of Numerical Optimization (Version 1.0.2)
2022
LEANR : Finds "Local Subnetworks" Within an Interaction Network which
Show Enrichment for Differentially Expressed Genes (Version 1.4.9)
2016
liGP : Locally Induced Gaussian Process Regression (Version 1.0.1)
2021
mbclusterwise : Clusterwise Multiblock Analyses (Version 1.0)
2016
minimaxdesign : Minimax and Minimax Projection Designs (Version 0.1.5)
2016
molic : Multivariate Outlier Detection in Contingency Tables (Version 2.0.3)
2020
MoMPCA : Inference and Clustering for Mixture of Multinomial Principal
Component Analysis (Version 1.0.1)
2020
odpc : One-Sided Dynamic Principal Components (Version 2.0.5)
2017
ORdensity : Identification of Differentially Expressed Genes (Version 1.0)
2020
parallelML : A Parallel-Voting Algorithm for many Classifiers (Version 1.2)
2015
pcoxtime : Penalized Cox Proportional Hazard Model for Time-Dependent
Covariates (Version 1.0.4)
2021
penDvine : Flexible Pair-Copula Estimation in D-Vines using Bivariate
Penalized Splines (Version 0.2.4)
2012
piRF : Prediction Intervals for Random Forests (Version 0.1.0)
2020
ProFound : Photometry Tools (Version 1.14.1)
2017
qualypsoss : Uncertainties of Climate Projections using Smoothing Splines (Version 1.1.1)
2019
R.SamBada : Processing Pipeline for "SamBada" from Pre- To Post-Processing (Version 0.1.3)
2019
RAEN : Random Approximate Elastic Net (RAEN) Variable Selection Method (Version 0.2)
2021
Rlda : Bayesian LDA for Mixed-Membership Clustering Analysis (Version 0.2.6)
2017
rTLS : Tools to Process Point Clouds Derived from Terrestrial Laser
Scanning (Version 0.2.5.6)
2021
scTEP : Single-Cell Trajectory Inference using Ensemble Pseudotimes (Version 0.1.0)
2022
sen2r : Find, Download and Process Sentinel-2 Data (Version 1.6.0)
2019
sglOptim : Generic Sparse Group Lasso Solver (Version 1.3.8)
2013
smog : Structural Modeling by using Overlapped Group Penalty (Version 2.1.0)
2019
tempoR : Characterizing Temporal Dysregulation (Version 1.0.4.4)
2019
utr.annotation : Annotate Variants in the Untranslated Regions (Version 1.0.4)
2021
vennLasso : Variable Selection for Heterogeneous Populations (Version 0.1.6)
2017
WEE : Weighted Estimated Equation (WEE) Approaches in Genetic
Case-Control Studies (Version 1.0)
2016
wkNNMI : A Mutual Information-Weighted k-NN Imputation Algorithm (Version 1.0.0)
2020
lpjmlkit : Toolkit for Basic LPJmL Handling (Version 1.0.11)
2023
eiCompare : Compares Different Ecological Inference Methods (Version 3.0.4)
2016
ExprNet : Characterizing Differential Expression of Selected Edges on a
Network (Version 1.0.0)
2023
stUPscales : Spatio-Temporal Uncertainty Propagation Across Multiple Scales (Version 1.0.3.5)
2018
comradesOO : Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data (Version 0.1.1)
2023
seqest : Sequential Method for Classification and Generalized Estimating Equations Problem (Version 1.0.1)
2020
rDNAse : Generating Various Numerical Representation Schemes of DNA Sequences (Version 1.1-1)
2016
NADIA : NA Data Imputation Algorithms (Version 0.4.2)
2020
iemisc : Irucka Embry's Miscellaneous Functions (Version 1.0.5)
2016
StrucDiv : Spatial Structural Diversity Quantification in Raster Data (Version 0.2.1)
2022
WES : Tools for Analyzing Wastewater and Environmental Sampling Data (Version 1.0.0)
2024
rusda : Interface to USDA Databases (Version 1.0.8)
2015
GLIDE : Global and Individual Tests for Direct Effects (Version 1.0.5)
2017
myTAI : Evolutionary Transcriptomics (Version 0.9.3)
2014
clogitLasso : Sparse Conditional Logistic Regression for Matched Studies (Version 1.1)
2016
taxize : Taxonomic Information from Around the Web (Version 0.9.100.1)
2012
WpProj : Linear p-Wasserstein Projections (Version 0.2.1)
2024
ptycho : Bayesian Variable Selection with Hierarchical Priors (Version 1.1-4)
2015
purgeR : Inbreeding-Purging Estimation in Pedigreed Populations (Version 1.8.2)
2021
qfa : Quantile-Frequency Analysis (QFA) of Time Series (Version 2.1)
2013
AATtools : Reliability and Scoring Routines for the Approach-Avoidance Task (Version 0.0.3)
2020
ADAPTS : Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells (Version 1.0.22)
2019
ADMM : Algorithms using Alternating Direction Method of Multipliers (Version 0.3.3)
2017
ADMMsigma : Penalized Precision Matrix Estimation via ADMM (Version 2.1)
2018
AEenrich : Adverse Event Enrichment Tests (Version 1.1.0)
2020
AICcPermanova : Model Selection of PERMANOVA Models Using AICc (Version 0.0.2)
2023
APIS : Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents (Version 2.0.8)
2019
AZIAD : Analyzing Zero-Inflated and Zero-Altered Data (Version 0.0.3)
2022
AdaptGauss : Gaussian Mixture Models (GMM) (Version 1.6)
2015
AlignLV : Multiple Group Item Response Theory Alignment Helpers for 'lavaan' and 'mirt' (Version 0.1.0.0)
2024
ApacheLogProcessor : Process the Apache Web Server Log Files (Version 0.2.3)
2015
Arothron : Geometric Morphometric Methods and Virtual Anthropology Tools (Version 2.0.5)
2018
BDWreg : Bayesian Inference for Discrete Weibull Regression (Version 1.3.0)
2016
BIEN : Tools for Accessing the Botanical Information and Ecology Network Database (Version 1.2.6)
2017
BSGW : Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression (Version 0.9.4)
2014
BSL : Bayesian Synthetic Likelihood (Version 3.2.5)
2018
BVSNLP : Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors (Version 1.1.9)
2017
BayesBinMix : Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions (Version 1.4.1)
2016
BayesFactor : Computation of Bayes Factors for Common Designs (Version 0.9.12-4.7)
2012
BayesfMRI : Spatial Bayesian Methods for Task Functional MRI Studies (Version 0.3.11)
2023
BayesianPlatformDesignTimeTrend : Simulate and Analyse Bayesian Platform Trial with Time Trend (Version 1.2.3)
2023
BeeGUTS : General Unified Threshold Model of Survival for Bees using Bayesian Inference (Version 1.3.0)
2022
BlockMissingData : Integrating Multi-Source Block-Wise Missing Data in Model Selection (Version 0.1.0)
2023
BootstrapQTL : Bootstrap cis-QTL Method that Corrects for the Winner's Curse (Version 1.0.5)
2018
BuyseTest : Generalized Pairwise Comparisons (Version 3.0.5)
2016
C443 : See a Forest for the Trees (Version 3.4.0)
2018
CARRoT : Predicting Categorical and Continuous Outcomes Using One in Ten Rule (Version 3.0.2)
2018
CDatanet : Econometrics of Network Data (Version 2.2.0)
2021
CFC : Cause-Specific Framework for Competing-Risk Analysis (Version 1.2.0)
2015
CICI : Causal Inference with Continuous (Multiple Time Point) Interventions (Version 0.9.3)
2023
CIMTx : Causal Inference for Multiple Treatments with a Binary Outcome (Version 1.2.0)
2020
CIpostSelect : Confidence Interval Post-Selection of Variable (Version 0.2.1)
2024
CNVScope : A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization (Version 3.7.2)
2018
COMMA : Correcting Misclassified Mediation Analysis (Version 1.1.0)
2024
CPAT : Change Point Analysis Tests (Version 0.1.0)
2018
CRTConjoint : Conditional Randomization Testing (CRT) Approach for Conjoint Analysis (Version 0.1.0)
2022
CVglasso : Lasso Penalized Precision Matrix Estimation (Version 1.0)
2018
CalibratR : Mapping ML Scores to Calibrated Predictions (Version 0.1.2)
2018
CenBAR : Broken Adaptive Ridge AFT Model with Censored Data (Version 0.1.1)
2020
CircSpaceTime : Spatial and Spatio-Temporal Bayesian Model for Circular Data (Version 0.9.0)
2019
ClusROC : ROC Analysis in Three-Class Classification Problems for Clustered Data (Version 1.0.2)
2022
ClustAssess : Tools for Assessing Clustering (Version 0.3.0)
2021
ClustVarLV : Clustering of Variables Around Latent Variables (Version 2.1.1)
2013
ClusterVAR : Fitting Latent Class Vector-Autoregressive (VAR) Models (Version 0.0.7)
2024
Clustering : Techniques for Evaluating Clustering (Version 1.7.10)
2020
CoNI : Correlation Guided Network Integration (CoNI) (Version 0.1.0)
2021
CoTiMA : Continuous Time Meta-Analysis ('CoTiMA') (Version 0.8.0)
2021
CohortPlat : Simulation of Cohort Platform Trials for Combination Treatments (Version 1.0.5)
2021
Compositional : Compositional Data Analysis (Version 7.1)
2016
CompositionalML : Machine Learning with Compositional Data (Version 1.0)
2024
CompositionalRF : Multivariate Random Forest with Compositional Responses (Version 1.0)
2024
CopernicusDEM : Copernicus Digital Elevation Models (Version 1.0.4)
2021
CopulaCenR : Copula-Based Regression Models for Multivariate Censored Data (Version 1.2.3)
2019
CopulaInference : Estimation and Goodness-of-Fit of Copula-Based Models with Arbitrary Distributions (Version 0.5.0)
2023
Counterfactual : Estimation and Inference Methods for Counterfactual Analysis (Version 1.2)
2016
CovTools : Statistical Tools for Covariance Analysis (Version 0.5.4)
2017
CoxICPen : Variable Selection for Cox's Model with Interval-Censored Data (Version 1.1.0)
2021
CptNonPar : Nonparametric Change Point Detection for Multivariate Time Series (Version 0.2.1)
2023
DAISIE : Dynamical Assembly of Islands by Speciation, Immigration and Extinction (Version 4.4.1)
2015
DCSmooth : Nonparametric Regression and Bandwidth Selection for Spatial Models (Version 1.1.2)
2021
DEGRE : Inferring Differentially Expressed Genes using Generalized Linear Mixed Models (Version 0.2.0)
2022
DEHOGT : Differentially Expressed Heterogeneous Overdispersion Gene Test for Count Data (Version 0.99.0)
2024
DEoptim : Global Optimization by Differential Evolution (Version 2.2-8)
2005
DMtest : Differential Methylation Tests (DMtest) (Version 1.0.0)
2021
DNMF : Discriminant Non-Negative Matrix Factorization (Version 1.4.2)
2015
DTDA.cif : Doubly Truncated Data Analysis, Cumulative Incidence Functions (Version 1.0.2)
2019
DTDA : Doubly Truncated Data Analysis (Version 3.0.1)
2009
DTRlearn2 : Statistical Learning Methods for Optimizing Dynamic Treatment Regimes (Version 1.1)
2019
DatastreamDSWS2R : Provides a Link Between the 'LSEG Datastream' System and R (Version 1.9.10)
2020
DiceKriging : Kriging Methods for Computer Experiments (Version 1.6.0)
2010
DiceView : Methods for Visualization of Computer Experiments Design and Surrogate (Version 2.2-0)
2010
Diderot : Bibliographic Network Analysis (Version 0.13)
2017
Dire : Linear Regressions with a Latent Outcome Variable (Version 2.2.0)
2021
Directional : A Collection of Functions for Directional Data Analysis (Version 6.9)
2015
Distance : Distance Sampling Detection Function and Abundance Estimation (Version 2.0.0)
2012
DynForest : Random Forest with Multivariate Longitudinal Predictors (Version 1.2.0)
2022
E4tools : Management and Processing Tools for Data Produced by the Empatica E4 (Version 0.1.1)
2019
EBASE : Estuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism (Version 1.1.0)
2024
EFDR : Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data (Version 1.3)
2015
EGRET : Exploration and Graphics for RivEr Trends (Version 3.0.9)
2014
ENMeval : Automated Tuning and Evaluations of Ecological Niche Models (Version 2.0.4)
2014
EPX : Ensemble of Phalanxes (Version 1.0.4)
2020
ESTER : Efficient Sequential Testing with Evidence Ratios (Version 0.2.0)
2017
EWSmethods : Forecasting Tipping Points at the Community Level (Version 1.3.1)
2023
EmiStatR : Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems (Version 1.2.3.0)
2016
EnsembleBase : Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling (Version 1.0.2)
2014
EpiModel : Mathematical Modeling of Infectious Disease Dynamics (Version 2.5.0)
2013
EpiSemble : Ensemble Based Machine Learning Approach for Predicting Methylation States (Version 0.1.1)
2022
EstimDiagnostics : Diagnostic Tools and Unit Tests for Statistical Estimators (Version 0.0.3)
2020
Euclimatch : Euclidean Climatch Algorithm (Version 1.0.2)
2023
ExpImage : Analysis of Images in Experiments (Version 0.10.1)
2021
ExtrPatt : Spatial Dependencies and Indices for Extremes (Version 0.1-4)
2023
ExtremalDep : Extremal Dependence Models (Version 0.0.4-2)
2019
FAVAR : Bayesian Analysis of a FAVAR Model (Version 0.1.3)
2022
FGLMtrunc : Truncated Functional Generalized Linear Models (Version 0.1.0)
2022
FLORAL : Fit Log-Ratio Lasso Regression for Compositional Data (Version 0.3.0)
2023
FMM : Rhythmic Patterns Modeling by FMM Models (Version 0.3.1)
2021
FSelectorRcpp : 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support (Version 0.3.13)
2017
FairMclus : Clustering for Data with Sensitive Attribute (Version 2.2.1)
2021
FastStepGraph : A Fast Algorithm for Sparse Precision Matrix Estimation (Version 0.1.1)
2023
FinancialInstrument : Financial Instrument Model Infrastructure and Meta-Data (Version 1.3.1)
2012
FixedPoint : Algorithms for Finding Fixed Point Vectors of Functions (Version 0.6.3)
2017
FourWayHMM : Parsimonious Hidden Markov Models for Four-Way Data (Version 1.0.0)
2021
FuncNN : Functional Neural Networks (Version 1.0)
2020
FuzzyClass : Fuzzy and Non-Fuzzy Classifiers (Version 0.1.6)
2022
GA : Genetic Algorithms (Version 3.2.4)
2012
GAGBLUP : Genetic Algorithm Assisted Genomic Best Liner Unbiased Prediction (Version 1.0)
2023
GALLO : Genomic Annotation in Livestock for Positional Candidate LOci (Version 1.5)
2020
GAparsimony : Searching Parsimony Models with Genetic Algorithms (Version 0.9.5)
2017
GB5mcPred : Gradient Boosting Algorithm for Predicting Methylation States (Version 0.1.0)
2023
GENLIB : Genealogical Data Analysis (Version 1.1.10)
2014
GFDmcv : General Hypothesis Testing Problems for Multivariate Coefficients of Variation (Version 0.1.0)
2023
GGIR : Raw Accelerometer Data Analysis (Version 3.1-5)
2013
GGMnonreg : Non-Regularized Gaussian Graphical Models (Version 1.0.0)
2021
GGoutlieR : Identify Individuals with Unusual Geo-Genetic Patterns (Version 1.0.2)
2023
GMCM : Fast Estimation of Gaussian Mixture Copula Models (Version 1.4)
2014
GMMAT : Generalized Linear Mixed Model Association Tests (Version 1.4.2)
2023
GPM : Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets (Version 3.0.1)
2018
GUniFrac : Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis (Version 1.8)
2012
GWEX : Multi-Site Stochastic Models for Daily Precipitation and Temperature (Version 1.1.3)
2019
GWLelast : Geographically Weighted Logistic Elastic Net Regression (Version 1.2.2)
2015
GWRM : Generalized Waring Regression Model for Count Data (Version 2.1.0.4)
2010
GWpcor : Geographically Weighted Partial Correlation Coefficient (Version 0.1.7)
2020
GaussianHMM1d : Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models (Version 1.1.1)
2019
GeDS : Geometrically Designed Spline Regression (Version 0.2.4)
2017
GenoPop : Genotype Imputation and Population Genomics Efficiently from Variant Call Formatted (VCF) Files (Version 0.9.3)
2024
GenoTriplo : Genotyping Triploids (or Diploids) from Luminescence Data (Version 1.1.0)
2023
GeoFIS : Spatial Data Processing for Decision Making (Version 1.1.0)
2021
GeoModels : Procedures for Gaussian and Non Gaussian Geostatistical (Large) Data Analysis (Version 2.0.7)
2022
GiNA : High Throughput Phenotyping (Version 1.0.1)
2016
HDCI : High Dimensional Confidence Interval Based on Lasso and Bootstrap (Version 1.0-2)
2017
HEMDAG : Hierarchical Ensemble Methods for Directed Acyclic Graphs (Version 2.7.4)
2017
HIMA : High-Dimensional Mediation Analysis (Version 2.3.0)
2017
HMMcopula : Markov Regime Switching Copula Models Estimation and Goodness-of-Fit (Version 1.1.0)
2018
HMP : Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP (Version 2.0.1)
2011
HMPTrees : Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data (Version 1.4)
2011
HaploCatcher : A Predictive Haplotyping Package (Version 1.0.4)
2023
HextractoR : Integrated Tool for Hairping Extraction of RNA Sequences (Version 1.4)
2018
HonestDiD : Robust Inference in Difference-in-Differences and Event Study Designs (Version 0.2.6)
2024
IDSpatialStats : Estimate Global Clustering in Infectious Disease (Version 0.4.0)
2016
IDmining : Intrinsic Dimension for Data Mining (Version 1.0.7)
2016
IETD : Inter-Event Time Definition (Version 1.0.0)
2020
IceSat2R : ICESat-2 Altimeter Data using R (Version 1.0.6)
2022
Information : Data Exploration with Information Theory (Weight-of-Evidence and Information Value) (Version 0.0.9)
2015
Infusion : Inference Using Simulation (Version 2.2.0)
2016
InteractionPoweR : Power Analyses for Interaction Effects in Cross-Sectional Regressions (Version 0.2.2)
2022
Interatrix : Compute Chi-Square Measures with Corrections (Version 1.1.4)
2015
InterpretMSSpectrum : Interpreting High Resolution Mass Spectra (Version 1.4.5)
2016
JMbayes : Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach (Version 0.8-85)
2012
JOUSBoost : Implements Under/Oversampling for Probability Estimation (Version 2.1.0)
2016
JWileymisc : Miscellaneous Utilities and Functions (Version 1.4.1)
2016
KScorrect : Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests (Version 1.4.0)
2016
Kmedians : K-Medians (Version 2.2.0)
2022
LCAvarsel : Variable Selection for Latent Class Analysis (Version 1.1)
2017
LEGIT : Latent Environmental & Genetic InTeraction (LEGIT) Model (Version 1.4.1)
2017
LMMstar : Repeated Measurement Models for Discrete Times (Version 1.1.0)
2021
LOMAR : Localization Microscopy Data Analysis (Version 0.5.0)
2021
LSEbootLS : Bootstrap Methods for Regression Models with Locally Stationary Errors (Version 0.1.0)
2024
LWFBrook90R : Simulate Evapotranspiration and Soil Moisture with the SVAT Model LWF-Brook90 (Version 0.6.1)
2021
LeArEst : Border and Area Estimation of Data Measured with Additive Error (Version 1.0.0)
2017
LipidMS : Lipid Annotation for LC-MS/MS DDA or DIA Data (Version 3.0.5)
2018
LorenzRegression : Lorenz and Penalized Lorenz Regressions (Version 2.1.0)
2023
MAGEE : Mixed Model Association Test for GEne-Environment Interaction (Version 1.4.2)
2023
MAGMA.R : MAny-Group MAtching (Version 1.0.3)
2024
MAGNAMWAR : A Pipeline for Meta-Genome Wide Association (Version 2.0.4)
2017
MAZE : Mediation Analysis for Zero-Inflated Mediators (Version 0.0.2)
2023
MCPModBC : Improved Inference in Multiple Comparison Procedure – Modelling (Version 1.1)
2023
MCPtests : Multiples Comparisons Procedures (Version 1.0.1)
2020
MDBED : Moran-Downton Bivariate Exponential Distribution (Version 1.0.0)
2020
MDDC : Modified Detecting Deviating Cells Algorithm in Pharmacovigilance (Version 1.0.0)
2024
MEGENA : Multiscale Clustering of Geometrical Network (Version 1.3.7)
2016
MERO : Performing Monte Carlo Expectation Maximization Random Forest Imputation for Biological Data (Version 0.1.2)
2022
MFPCA : Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains (Version 1.3-10)
2016
MFSIS : Model-Free Sure Independent Screening Procedures (Version 0.2.1)
2021
MG1StationaryProbability : Computes Stationary Distribution for M/G/1 Queuing System (Version 0.1.2)
2023
MHD : Metric Halfspace Depth (Version 0.1.2)
2023
MJMbamlss : Multivariate Joint Models with 'bamlss' (Version 0.1.0)
2023
MKclass : Statistical Classification (Version 0.5)
2020
MKmisc : Miscellaneous Functions from M. Kohl (Version 1.9)
2008
ML.MSBD : Maximum Likelihood Inference on Multi-State Trees (Version 1.2.1)
2017
MPI : Computation of Multidimensional Poverty Index (MPI) (Version 0.1.0)
2022
MRFA : Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach (Version 0.6)
2017
MSCquartets : Analyzing Gene Tree Quartets under the Multi-Species Coalescent (Version 3.0)
2019
MSPRT : A Modified Sequential Probability Ratio Test (MSPRT) (Version 3.0)
2018
MSTest : Hypothesis Testing for Markov Switching Models (Version 0.1.3)
2022
MSinference : Multiscale Inference for Nonparametric Time Trend(s) (Version 0.2.1)
2023
MSmix : Finite Mixtures of Mallows Models with Spearman Distance for Full and Partial Rankings (Version 1.0.2)
2024
MUVR2 : Multivariate Methods with Unbiased Variable Selection (Version 0.1.0)
2024
MXM : Feature Selection (Including Multiple Solutions) and Bayesian Networks (Version 1.5.5)
2014
MachineShop : Machine Learning Models and Tools (Version 3.8.0)
2018
MarZIC : Marginal Mediation Effects with Zero-Inflated Compositional Mediator (Version 1.0.0)
2023
MarketMatching : Market Matching and Causal Impact Inference (Version 1.2.1)
2018
Markovchart : Markov Chain-Based Cost-Optimal Control Charts (Version 2.1.5)
2020
MatrixHMM : Parsimonious Families of Hidden Markov Models for Matrix-Variate Longitudinal Data (Version 1.0.0)
2024
MatrixMixtures : Model-Based Clustering via Matrix-Variate Mixture Models (Version 1.0.0)
2021
Mediana : Clinical Trial Simulations (Version 1.0.8)
2015
MedianaDesigner : Power and Sample Size Calculations for Clinical Trials (Version 0.13)
2021
MetaNet : Network Analysis for Omics Data (Version 0.1.2)
2024
MiMIR : Metabolomics-Based Models for Imputing Risk (Version 1.5)
2022
MicrobiomeStat : Statistical Methods for Microbiome Compositional Data (Version 1.2)
2021
MixRF : A Random-Forest-Based Approach for Imputing Clustered Incomplete Data (Version 1.0)
2016
MixedIndTests : Tests of Randomness and Tests of Independence (Version 1.2.0)
2021
MoBPS : Modular Breeding Program Simulator (Version 1.6.64)
2020
MonoInc : Monotonic Increasing (Version 1.1)
2016
Morpho : Calculations and Visualisations Related to Geometric Morphometrics (Version 2.12)
2013
MultIS : Reconstruction of Clones from Integration Site Readouts and Visualization (Version 0.6.2)
2021
MultipleBubbles : Test and Detection of Explosive Behaviors for Time Series (Version 0.2.0)
2018
NAP : Non-Local Alternative Priors in Psychology (Version 1.1)
2021
NCA : Necessary Condition Analysis (Version 4.0.2)
2015
NCC : Simulation and Analysis of Platform Trials with Non-Concurrent Controls (Version 1.0)
2023
NMF : Algorithms and Framework for Nonnegative Matrix Factorization (NMF) (Version 0.28)
2009
NNS : Nonlinear Nonparametric Statistics (Version 10.9.3)
2016
NPflow : Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data (Version 0.13.5)
2016
NRejections : Metrics for Multiple Testing with Correlated Outcomes (Version 1.2.0)
2018
NetRep : Permutation Testing Network Module Preservation Across Datasets (Version 1.2.7)
2016
NetworkDistance : Distance Measures for Networks (Version 0.3.4)
2017
NetworkExtinction : Extinction Simulation in Ecological Networks (Version 1.0.3)
2018
NetworkToolbox : Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis (Version 1.4.2)
2017
NeuroDecodeR : Decode Information from Neural Activity (Version 0.2.0)
2022
NonParRolCor : a Non-Parametric Statistical Significance Test for Rolling Window Correlation (Version 0.8.0)
2021
OBL : Optimum Block Length (Version 0.2.1)
2022
ODRF : Oblique Decision Random Forest for Classification and Regression (Version 0.0.4)
2023
ORION : Ordinal Relations (Version 1.0.3)
2020
OmicKriging : Poly-Omic Prediction of Complex TRaits (Version 1.4.0)
2013
PAGWAS : Pathway Analysis Methods for Genomewide Association Data (Version 2.0)
2013
PAsso : Assessing the Partial Association Between Ordinal Variables (Version 0.1.10)
2020
PINSPlus : Clustering Algorithm for Data Integration and Disease Subtyping (Version 2.0.7)
2018
PLMIX : Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings (Version 2.1.1)
2016
PNAR : Poisson Network Autoregressive Models (Version 1.7)
2022
POUMM : The Phylogenetic Ornstein-Uhlenbeck Mixed Model (Version 2.1.7)
2017
PQLseq : Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies (Version 1.2.1)
2018
PTE : Personalized Treatment Evaluator (Version 1.7)
2014
PUGMM : Parsimonious Ultrametric Gaussian Mixture Models (Version 0.1.0)
2024
PUlasso : High-Dimensional Variable Selection with Presence-Only Data (Version 3.2.5)
2017
PWEXP : Piecewise Exponential Distribution Prediction Model (Version 0.5.0)
2023
PanelMatch : Matching Methods for Causal Inference with Time-Series Cross-Sectional Data (Version 2.2.0)
2020
ParBayesianOptimization : Parallel Bayesian Optimization of Hyperparameters (Version 1.2.6)
2018
ParetoPosStable : Computing, Fitting and Validating the PPS Distribution (Version 1.1)
2014
PartialNetwork : Estimating Peer Effects Using Partial Network Data (Version 1.0.4)
2023
PhylogeneticEM : Automatic Shift Detection using a Phylogenetic EM (Version 1.7.0)
2017
PortfolioAnalytics : Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios (Version 2.0.0)
2015
ProcMod : Informative Procrustean Matrix Correlation (Version 1.0.8)
2019
QTL.gCIMapping.GUI : QTL Genome-Wide Composite Interval Mapping with Graphical User Interface (Version 2.1.1)
2018
QTL.gCIMapping : QTL Genome-Wide Composite Interval Mapping (Version 3.4)
2018
QuadratiK : Collection of Methods Constructed using Kernel-Based Quadratic Distances (Version 1.1.2)
2024
QurvE : Robust and User-Friendly Analysis of Growth and Fluorescence Curves (Version 1.1.1)
2023
R2BEAT : Multistage Sampling Allocation and Sample Selection (Version 1.0.5)
2019
R2MLwiN : Running 'MLwiN' from Within R (Version 0.8-9)
2012
RABR : Simulations for Response Adaptive Block Randomization Design (Version 0.1.1)
2021
RAINBOWR : Genome-Wide Association Study with SNP-Set Methods (Version 0.1.35)
2019
RBesT : R Bayesian Evidence Synthesis Tools (Version 1.7-3)
2017
RCTS : Clustering Time Series While Resisting Outliers (Version 0.2.4)
2022
REN : Regularization Ensemble for Robust Portfolio Optimization (Version 0.1.0)
2024
REPTILE : Regulatory DNA Element Prediction (Version 1.0)
2016
RGBM : LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction (Version 1.0-11)
2017
RGMM : Robust Mixture Model (Version 2.1.0)
2022
RHRV : Heart Rate Variability Analysis of ECG Data (Version 5.0.0)
2008
RHybridFinder : Identification of Hybrid Peptides in Immunopeptidomic Analyses (Version 0.2.0)
2021
RISCA : Causal Inference and Prediction in Cohort-Based Analyses (Version 1.0.5)
2019
RJcluster : A Fast Clustering Algorithm for High Dimensional Data Based on the Gram Matrix Decomposition (Version 3.2.4)
2020
RKEEL : Using 'KEEL' in R Code (Version 1.3.4)
2016
RLumCarlo : Monte-Carlo Methods for Simulating Luminescence Phenomena (Version 0.1.9)
2020
RMSDp : Refined Modified Stahel-Donoho (MSD) Estimators for Outlier Detection (Parallel Version) (Version 0.1.1)
2023
RMTL : Regularized Multi-Task Learning (Version 0.9.9)
2019
RMediation : Mediation Analysis Confidence Intervals (Version 1.2.2)
2011
RMixtCompIO : Minimal Interface of the C++ 'MixtComp' Library for Mixture Models with Heterogeneous and (Partially) Missing Data (Version 4.0.11)
2019
RNAmf : Recursive Non-Additive Emulator for Multi-Fidelity Data (Version 1.0.0)
2023
ROptimus : A Parallel General-Purpose Adaptive Optimisation Engine (Version 3.0.0)
2023
RPDTest : A New Type of Test Statistic and Method for Multinomial Goodness-of-Fit Test (Version 0.0.2)
2023
RPPASPACE : Reverse-Phase Protein Array Super Position and Concentration Evaluation (Version 1.0.10)
2020
RRphylo : Phylogenetic Ridge Regression Methods for Comparative Studies (Version 2.8.1)
2018
RRreg : Correlation and Regression Analyses for Randomized Response Data (Version 0.7.5)
2014
RSC : Robust and Sparse Correlation Matrix (Version 2.0.4)
2020
RZooRoH : Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes (Version 0.3.2.1)
2018
RaJIVE : Robust Angle Based Joint and Individual Variation Explained (Version 1.0)
2021
RaSEn : Random Subspace Ensemble Classification and Variable Screening (Version 3.0.0)
2020
Rcrawler : Web Crawler and Scraper (Version 0.1.9-1)
2017
ReIns : Functions from "Reinsurance: Actuarial and Statistical Aspects" (Version 1.0.14)
2016
ReporterScore : Generalized Reporter Score-Based Enrichment Analysis for Omics Data (Version 0.1.8)
2024
ResIN : Response Item Networks (Version 2.0.0)
2023
Rlgt : Bayesian Exponential Smoothing Models with Trend Modifications (Version 0.2-2)
2019
Rlof : R Parallel Implementation of Local Outlier Factor(LOF) (Version 1.1.3)
2011
Rnmr1D : Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra (Version 1.3.2)
2018
RobGARCHBoot : Robust Bootstrap Forecast Densities for GARCH Models (Version 1.2.0)
2019
RobRegression : Robust Multivariate Regression (Version 0.1.0)
2024
Robyn : Semi-Automated Marketing Mix Modeling (MMM) from Meta Marketing Science (Version 3.11.1)
2022
RootsExtremaInflections : Finds Roots, Extrema and Inflection Points of a Curve (Version 1.2.1)
2014
RprobitB : Bayesian Probit Choice Modeling (Version 1.1.4)
2021
Rrepest : An Analyzer of International Large Scale Assessments in Education (Version 1.3.0)
2023
SAMGEP : A Semi-Supervised Method for Prediction of Phenotype Event Times (Version 0.1.0-1)
2021
SAMprior : Self-Adapting Mixture (SAM) Priors (Version 1.1.1)
2023
SAVER : Single-Cell RNA-Seq Gene Expression Recovery (Version 1.1.2)
2018
SCOR : Spherically Constrained Optimization Routine (Version 1.1.2)
2019
SCORNET : Semi-Supervised Calibration of Risk with Noisy Event Times (Version 0.1.1)
2020
SCdeconR : Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference (Version 1.0.0)
2024
SEA : Segregation Analysis (Version 2.0.1)
2018
SGP : Student Growth Percentiles & Percentile Growth Trajectories (Version 2.2-0.0)
2008
SIDES : Subgroup Identification Based on Differential Effect Search (Version 1.18)
2016
SIMMS : Subnetwork Integration for Multi-Modal Signatures (Version 1.3.2)
2013
SISIR : Select Intervals Suited for Functional Regression (Version 0.2.3)
2016
SLEMI : Statistical Learning Based Estimation of Mutual Information (Version 1.0.2)
2019
SLOPE : Sorted L1 Penalized Estimation (Version 0.5.1)
2015
SNPannotator : Investigating the Functional Characteristics of Selected SNPs and Their Vicinity Genomic Region (Version 0.2.6.0)
2022
SPUTNIK : Spatially Automatic Denoising for Imaging Mass Spectrometry Toolkit (Version 1.4.2)
2018
SSDM : Stacked Species Distribution Modelling (Version 0.2.9)
2016
SSLR : Semi-Supervised Classification, Regression and Clustering Methods (Version 0.9.3.3)
2020
SemiPar.depCens : Copula Based Cox Proportional Hazards Models for Dependent Censoring (Version 0.1.3)
2024
SenTinMixt : Parsimonious Mixtures of MSEN and MTIN Distributions (Version 1.0.0)
2021
SeqKat : Detection of Kataegis (Version 0.0.8)
2017
SharkDemography : Shark Demographic Analyses Using Leslie Matrix Models (Version 1.1.0)
2023
ShortForm : Automatic Short Form Creation (Version 0.5.5)
2017
SimSurvey : Test Surveys by Simulating Spatially-Correlated Populations (Version 0.1.6)
2020
SpaTopic : Topic Inference to Identify Tissue Architecture in Multiplexed Images (Version 1.1.0)
2024
SparseMDC : Implementation of SparseMDC Algorithm (Version 0.99.5)
2018
SpatialPosition : Spatial Position Models (Version 2.1.2)
2015
SpeTestNP : Non-Parametric Tests of Parametric Specifications (Version 1.1.0)
2022
SpiceFP : Sparse Method to Identify Joint Effects of Functional Predictors (Version 0.1.2)
2021
Sstack : Bootstrap Stacking of Random Forest Models for Heterogeneous Data (Version 1.0.1)
2018
StAMPP : Statistical Analysis of Mixed Ploidy Populations (Version 1.6.3)
2013
StepwiseTest : Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion (Version 1.0)
2016
StochBlock : Stochastic Blockmodeling of One-Mode and Linked Networks (Version 0.1.2)
2023
SuRF.vs : Subsampling Ranking Forward Selection (SuRF) (Version 1.1.0.1)
2022
SurvSparse : Survival Analysis with Sparse Longitudinal Covariates (Version 0.1)
2023
TAG : Transformed Additive Gaussian Processes (Version 0.5.1)
2019
TCIU : Spacekime Analytics, Time Complexity and Inferential Uncertainty (Version 1.2.7)
2020
TDApplied : Machine Learning and Inference for Topological Data Analysis (Version 3.0.4)
2022
TGS : Rapid Reconstruction of Time-Varying Gene Regulatory Networks (Version 1.0.1)
2018
TPEA : A Novel Topology-Based Pathway Enrichment Analysis Approach (Version 3.1.0)
2016
TRexSelector : T-Rex Selector: High-Dimensional Variable Selection & FDR Control (Version 1.0.0)
2022
TSP : Traveling Salesperson Problem (TSP) (Version 1.2-4)
2006
TcGSA : Time-Course Gene Set Analysis (Version 0.12.10)
2014
TempStable : A Collection of Methods to Estimate Parameters of Different Tempered Stable Distributions (Version 0.2.2)
2023
TestDesign : Optimal Test Design Approach to Fixed and Adaptive Test Construction (Version 1.7.0)
2019
TopKSignal : A Convex Optimization Tool for Signal Reconstruction from Multiple Ranked Lists (Version 1.0)
2024
TraMineRextras : TraMineR Extension (Version 0.6.8)
2012
TriadSim : Simulating Triad Genomewide Genotypes (Version 0.3.0)
2017
VIC5 : The Variable Infiltration Capacity (VIC) Hydrological Model (Version 0.2.6)
2021
VSURF : Variable Selection Using Random Forests (Version 1.2.0)
2013
VUROCS : Volume under the ROC Surface for Multi-Class ROC Analysis (Version 1.0)
2020
VertexWiseR : Simplified Vertex-Wise Analyses of Whole-Brain and Hippocampal Surface (Version 1.1.0)
2024
WGCNA : Weighted Correlation Network Analysis (Version 1.73)
2010
WRTDStidal : Weighted Regression for Water Quality Evaluation in Tidal Waters (Version 1.1.4)
2016
WaverideR : Extracting Signals from Wavelet Spectra (Version 0.3.2)
2023
WebGestaltR : Gene Set Analysis Toolkit WebGestaltR (Version 0.4.6)
2017
WeightedCluster : Clustering of Weighted Data (Version 1.8-0)
2013
YaleToolkit : Data Exploration Tools from Yale University (Version 4.2.3)
2007
ZIPFA : Zero Inflated Poisson Factor Analysis (Version 0.8.1)
2019
abcrf : Approximate Bayesian Computation via Random Forests (Version 1.9)
2015
abn : Modelling Multivariate Data with Additive Bayesian Networks (Version 3.1.1)
2011
adabag : Applies Multiclass AdaBoost.M1, SAMME and Bagging (Version 5.0)
2006
adamethods : Archetypoid Algorithms and Anomaly Detection (Version 1.2.1)
2018
adapt4pv : Adaptive Approaches for Signal Detection in Pharmacovigilance (Version 0.2-3)
2020
adaptDiag : Bayesian Adaptive Designs for Diagnostic Trials (Version 0.1.0)
2021
ade4 : Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences (Version 1.7-22)
2002
adjustedCurves : Confounder-Adjusted Survival Curves and Cumulative Incidence Functions (Version 0.11.2)
2022
admix : Package Admix for Admixture (aka Contamination) Models (Version 2.3.3)
2021
ag5Tools : Toolbox for Downloading and Extracting Copernicus AgERA5 Data (Version 0.0.2)
2022
agcounts : Calculate 'ActiGraph' Counts from Accelerometer Data (Version 0.6.6)
2024
aifeducation : Artificial Intelligence for Education (Version 0.3.3)
2023
aihuman : Experimental Evaluation of Algorithm-Assisted Human Decision-Making (Version 0.1.0)
2023
aliases2entrez : Converts Human gene symbols to entrez IDs (Version 0.1.2)
2019
antaresRead : Import, Manipulate and Explore the Results of an 'Antares' Simulation (Version 2.7.2)
2017
arf : Adversarial Random Forests (Version 0.2.0)
2022
arrangements : Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions (Version 1.1.9)
2018
ashapesampler : Generating Alpha Shapes (Version 1.0.0)
2024
asremlPlus : Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences (Version 4.4.40)
2015
assignPOP : Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework (Version 1.3.0)
2016
astrochron : A Computational Tool for Astrochronology (Version 1.4)
2014
atakrig : Area-to-Area Kriging (Version 0.9.8.1)
2020
autoMrP : Improving MrP with Ensemble Learning (Version 1.0.6)
2021
autoRasch : Semi-Automated Rasch Analysis (Version 0.2.2)
2022
autohrf : Automated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis (Version 1.1.3)
2022
autostsm : Automatic Structural Time Series Models (Version 3.1.5)
2021
avotrex : A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder (Version 1.3.0)
2024
azuremlsdk : Interface to the 'Azure Machine Learning' 'SDK' (Version 1.10.0)
2019
baclava : Bayesian Analysis of Cancer Latency with Auxiliary Variable Augmentation (Version 1.0)
2024
bagged.outliertrees : Robust Explainable Outlier Detection Based on OutlierTree (Version 1.0.0)
2021
baggingbwsel : Bagging Bandwidth Selection in Kernel Density and Regression Estimation (Version 1.1)
2021
basket : Basket Trial Analysis (Version 0.10.11)
2019
baskexact : Analytical Calculation of Basket Trial Operating Characteristics (Version 1.0.1)
2021
basksim : Simulation-Based Calculation of Basket Trial Operating Characteristics (Version 1.0.0)
2024
batchtools : Tools for Computation on Batch Systems (Version 0.9.17)
2016
bayesCureRateModel : Bayesian Cure Rate Modeling for Time-to-Event Data (Version 1.3)
2024
bayesboot : An Implementation of Rubin's (1981) Bayesian Bootstrap (Version 0.2.2)
2016
bayesreg : Bayesian Regression Models with Global-Local Shrinkage Priors (Version 1.3)
2016
bcf : Causal Inference using Bayesian Causal Forests (Version 2.0.2)
2018
bdc : Biodiversity Data Cleaning (Version 1.1.4)
2022
benchmarkme : Crowd Sourced System Benchmarks (Version 1.0.8)
2016
bestNormalize : Normalizing Transformation Functions (Version 1.9.1)
2017
betaclust : A Family of Beta Mixture Models for Clustering Beta-Valued DNA Methylation Data (Version 1.0.4)
2022
betapart : Partitioning Beta Diversity into Turnover and Nestedness Components (Version 1.6)
2012
bhmbasket : Bayesian Hierarchical Models for Basket Trials (Version 0.9.5)
2021
biclustermd : Biclustering with Missing Data (Version 0.2.3)
2019
bigDM : Scalable Bayesian Disease Mapping Models for High-Dimensional Data (Version 0.5.5)
2022
bigSurvSGD : Big Survival Analysis Using Stochastic Gradient Descent (Version 0.0.1)
2020
biganalytics : Utilities for 'big.matrix' Objects from Package 'bigmemory' (Version 1.1.22)
2010
bigergm : Fit, Simulate, and Diagnose Hierarchical Exponential-Family Models for Big Networks (Version 1.2.3)
2024
bigparallelr : Easy Parallel Tools (Version 0.3.2)
2019
bigsnpr : Analysis of Massive SNP Arrays (Version 1.12.15)
2017
bigstatsr : Statistical Tools for Filebacked Big Matrices (Version 1.6.1)
2017
bingat : Binary Graph Analysis Tools (Version 1.3)
2014
binomialRF : Binomial Random Forest Feature Selection (Version 0.1.0)
2020
biomod2 : Ensemble Platform for Species Distribution Modeling (Version 4.2-5-2)
2012
biopixR : Extracting Insights from Biological Images (Version 1.1.0)
2024
bisque : Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models (Version 1.0.2)
2019
biwavelet : Conduct Univariate and Bivariate Wavelet Analyses (Version 0.20.22)
2012
blackbox : Black Box Optimization and Exploration of Parameter Space (Version 1.1.46)
2016
blockmodeling : Generalized and Classical Blockmodeling of Valued Networks (Version 1.1.5)
2008
bootPLS : Bootstrap Hyperparameter Selection for PLS Models and Extensions (Version 1.0.1)
2021
bootcluster : Bootstrapping Estimates of Clustering Stability (Version 0.3.2)
2017
brada : Bayesian Response-Adaptive Design Analysis (Version 1.0)
2023
brainGraph : Graph Theory Analysis of Brain MRI Data (Version 3.1.0)
2015
breakpoint : An R Package for Multiple Break-Point Detection via the Cross-Entropy Method (Version 1.2)
2014
bst : Gradient Boosting (Version 0.3-24)
2011
bstrl : Bayesian Streaming Record Linkage (Version 1.0.2)
2022
bvhar : Bayesian Vector Heterogeneous Autoregressive Modeling (Version 2.1.2)
2023
calibrar : Automated Parameter Estimation for Complex Models (Version 0.9.0)
2016
cape : Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice (Version 3.1.2)
2013
caret : Classification and Regression Training (Version 6.0-94)
2007
catlearn : Formal Psychological Models of Categorization and Learning (Version 1.0)
2016
cats : Cohort Platform Trial Simulation (Version 1.0.2)
2022
cauchypca : Robust Principal Component Analysis Using the Cauchy Distribution (Version 1.3)
2022
cauphy : Trait Evolution on Phylogenies Using the Cauchy Process (Version 1.0.3)
2023
causalCmprsk : Nonparametric and Cox-Based Estimation of Average Treatment Effects in Competing Risks (Version 2.0.0)
2020
cbl : Causal Discovery under a Confounder Blanket (Version 0.1.3)
2022
cdcatR : Cognitive Diagnostic Computerized Adaptive Testing (Version 1.0.6)
2020
cdmTools : Useful Tools for Cognitive Diagnosis Modeling (Version 1.0.5)
2021
cemco : Fit 'CemCO' Algorithm (Version 0.2)
2020
cffdrs : Canadian Forest Fire Danger Rating System (Version 1.9.0)
2015
cgaim : Constrained Groupwise Additive Index Models (Version 1.0.1)
2022
changepointTests : Change Point Tests for Joint Distributions and Copulas (Version 0.1.7)
2021
chicane : Capture Hi-C Analysis Engine (Version 0.1.8)
2018
cia : Learn and Apply Directed Acyclic Graphs for Causal Inference (Version 1.0.0)
0
circularEV : Extreme Value Analysis for Circular Data (Version 0.1.1)
2021
clespr : Composite Likelihood Estimation for Spatial Data (Version 1.1.2)
2018
clinDR : Simulation and Analysis Tools for Clinical Dose Response Modeling (Version 2.4.1)
2017
clordr : Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data (Version 1.7.0)
2018
clustcurv : Determining Groups in Multiples Curves (Version 2.0.2)
2019
clustermq : Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) (Version 0.9.5)
2017
clustvarsel : Variable Selection for Gaussian Model-Based Clustering (Version 2.3.4)
2006
colocalized : Clusters of Colocalized Sequences (Version 0.2.0)
2019
combiter : Combinatorics Iterators (Version 1.0.3)
2016
conStruct : Models Spatially Continuous and Discrete Population Genetic Structure (Version 1.0.6)
2018
condSURV : Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data (Version 2.0.4)
2016
confintROB : Confidence Intervals for Robust and Classical Linear Mixed Model Estimators (Version 1.0-1)
2024
conformalClassification : Transductive and Inductive Conformal Predictions for Classification Problems (Version 1.0.0)
2017
conleyreg : Estimations using Conley Standard Errors (Version 0.1.7)
2021
contsurvplot : Visualize the Effect of a Continuous Variable on a Time-to-Event Outcome (Version 0.2.1)
2022
copyseparator : Assembling Long Gene Copies from Short Read Data (Version 1.2.0)
2022
corr2D : Implementation of 2D Correlation Analysis in R (Version 1.0.3)
2016
covdepGE : Covariate Dependent Graph Estimation (Version 1.0.1)
2022
cpfa : Classification with Parallel Factor Analysis (Version 1.1-6)
2022
cpi : Conditional Predictive Impact (Version 0.1.4)
2022
cpmBigData : Fitting Semiparametric Cumulative Probability Models for Big Data (Version 0.0.1)
2023
creditmodel : Toolkit for Credit Modeling, Analysis and Visualization (Version 1.3.1)
2019
crosstalkr : Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks (Version 1.0.5)
2021
crso : Cancer Rule Set Optimization ('crso') (Version 0.1.1)
2019
crt2power : Designing Cluster-Randomized Trials with Two Co-Primary Outcomes (Version 1.1.0)
2024
csa : A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration (Version 0.7.1)
2020
cubfits : Codon Usage Bias Fits (Version 0.1-4)
2014
cutpointr : Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks (Version 1.1.2)
2018
cv : Cross-Validating Regression Models (Version 2.0.3)
2023
cvwrapr : Tools for Cross Validation (Version 1.0)
2021
cytominer : Methods for Image-Based Cell Profiling (Version 0.2.2)
2017
dCovTS : Distance Covariance and Correlation for Time Series Analysis (Version 1.4)
2016
dMod : Dynamic Modeling and Parameter Estimation in ODE Models (Version 1.0.2)
2015
dQTG.seq : A BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2 (Version 1.0.2)
2022
dartR.base : Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 0.98)
2023
dartR.sexlinked : Analysing SNP Data to Identify Sex-Linked Markers (Version 1.0.5)
2024
dartR : Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.7)
2017
data.tree : General Purpose Hierarchical Data Structure (Version 1.1.0)
2015
datafsm : Estimating Finite State Machine Models from Data (Version 0.2.4)
2015
datanugget : Create, and Refine Data Nuggets (Version 1.3.1)
2020
dataprep : Efficient and Flexible Data Preprocessing Tools (Version 0.1.5)
2021
ddsPLS : Data-Driven Sparse Partial Least Squares (Version 1.2.1)
2018
deepgp : Bayesian Deep Gaussian Processes using MCMC (Version 1.1.3)
2020
deltaccd : Quantify Rhythmic Gene Co-Expression Relative to a Reference (Version 1.0.2)
2022
dendroNetwork : Create Networks of Dendrochronological Series using Pairwise Similarity (Version 0.5.4)
2024
depCensoring : Statistical Methods for Survival Data with Dependent Censoring (Version 0.1.3)
2024
detectR : Change Point Detection (Version 0.3.0)
2021
detrendr : Detrend Images (Version 0.6.15)
2017
diagL1 : Routines for Fit, Inference and Diagnostics in Linear L1 and LAD Models (Version 1.0.0)
2023
dispositionEffect : Analysis of Disposition Effect on Financial Portfolios (Version 1.0.1)
2021
dissever : Spatial Downscaling using the Dissever Algorithm (Version 0.2-3)
2017
distantia : Assessing Dissimilarity Between Multivariate Time Series (Version 1.0.2)
2019
doFuture : Use Foreach to Parallelize via the Future Framework (Version 1.0.1)
2016
doMC : Foreach Parallel Adaptor for 'parallel' (Version 1.3.8)
2009
doMPI : Foreach Parallel Adaptor for the Rmpi Package (Version 0.2.2)
2009
doParallel : Foreach Parallel Adaptor for the 'parallel' Package (Version 1.0.17)
2011
doRNG : Generic Reproducible Parallel Backend for 'foreach' Loops (Version 1.8.6)
2011
doRedis : 'Foreach' Parallel Adapter Using the 'Redis' Database (Version 3.0.2)
2010
doSNOW : Foreach Parallel Adaptor for the 'snow' Package (Version 1.0.20)
2009
dplR : Dendrochronology Program Library in R (Version 1.7.7)
2007
drimmR : Estimation, Simulation and Reliability of Drifting Markov Models (Version 1.0.1)
2021
drtmle : Doubly-Robust Nonparametric Estimation and Inference (Version 1.1.2)
2017
drugDemand : Drug Demand Forecasting (Version 0.1.3)
2023
drugdevelopR : Utility-Based Optimal Phase II/III Drug Development Planning (Version 1.0.1)
2024
dtwclust : Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance (Version 6.0.0)
2015
dynamAedes : A Unified Mechanistic Model for the Population Dynamics of Invasive Aedes Mosquitoes (Version 2.2.9)
2022
dynetNLAResistance : Resisting Neighbor Label Attack in a Dynamic Network (Version 0.1.0)
2016
eNchange : Ensemble Methods for Multiple Change-Point Detection (Version 1.0)
2020
earlygating : Properties of Bayesian Early Gating Designs (Version 1.1)
2018
easy.glmnet : Functions to Simplify the Use of 'glmnet' for Machine Learning (Version 1.0)
2024
ecoCopula : Graphical Modelling and Ordination using Copulas (Version 1.0.2)
2020
ecocbo : Calculating Optimum Sampling Effort in Community Ecology (Version 0.12.0)
2023
econet : Estimation of Parameter-Dependent Network Centrality Measures (Version 1.0.0.1)
2018
ecospat : Spatial Ecology Miscellaneous Methods (Version 4.1.1)
2014
ecpc : Flexible Co-Data Learning for High-Dimensional Prediction (Version 3.1.1)
2021
ei : Ecological Inference (Version 1.3-3)
2016
eicm : Explicit Interaction Community Models (Version 1.0.3)
2020
ellipticalsymmetry : Elliptical Symmetry Tests (Version 0.1.2)
2020
enmSdmX : Species Distribution Modeling and Ecological Niche Modeling (Version 1.1.9)
2022
enmpa : Ecological Niche Modeling using Presence-Absence Data (Version 0.1.8)
2023
enpls : Ensemble Partial Least Squares Regression (Version 6.1)
2014
envi : Environmental Interpolation using Spatial Kernel Density Estimation (Version 1.0.0)
2020
epizootic : Spatially Explicit Population Models of Disease Transmission in Wildlife (Version 1.0.0)
2024
evapoRe : Evapotranspiration R Recipes (Version 1.0.0)
2023
evian : Evidential Analysis of Genetic Association Data (Version 2.1.0)
2018
evinf : Inference with Extreme Value Inflated Count Data (Version 0.8.10)
2023
evolqg : Evolutionary Quantitative Genetics (Version 0.3-4)
2015
ewoc : Escalation with Overdose Control (Version 0.3.0)
2017
extBatchMarking : Extended Batch Marking Models (Version 1.1.0)
2023
exuber : Econometric Analysis of Explosive Time Series (Version 1.0.2)
2018
eyetrackingR : Eye-Tracking Data Analysis (Version 0.2.1)
2015
ezCutoffs : Fit Measure Cutoffs in SEM (Version 1.0.1)
2019
fDMA : Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes (Version 2.2.7)
2017
fHMM : Fitting Hidden Markov Models to Financial Data (Version 1.4.1)
2021
fPASS : Power and Sample Size for Projection Test under Repeated Measures (Version 1.0.0)
2023
fabMix : Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components (Version 5.1)
2018
fabisearch : Change Point Detection in High-Dimensional Time Series Networks (Version 0.0.4.5)
2021
fastLink : Fast Probabilistic Record Linkage with Missing Data (Version 0.6.1)
2017
fastcmprsk : Fine-Gray Regression via Forward-Backward Scan (Version 1.24.10)
2019
fastml : Fast Machine Learning Model Training and Evaluation (Version 0.1.0)
0
fastnet : Large-Scale Social Network Analysis (Version 1.0.0)
2016
fastshap : Fast Approximate Shapley Values (Version 0.1.1)
2019
fdANOVA : Analysis of Variance for Univariate and Multivariate Functional Data (Version 0.1.2)
2017
fda.usc : Functional Data Analysis and Utilities for Statistical Computing (Version 2.2.0)
2011
fdaMocca : Model-Based Clustering for Functional Data with Covariates (Version 0.1-1)
2021
fdaSP : Sparse Functional Data Analysis Methods (Version 1.1.1)
2023
fdasrvf : Elastic Functional Data Analysis (Version 2.3.3)
2012
fdrci : Permutation-Based FDR Point and Confidence Interval Estimation (Version 2.4)
2012
fect : Fixed Effects Counterfactuals (Version 1.0.0)
2022
fiberLD : Fiber Length Determination (Version 0.1-8)
2019
finnts : Microsoft Finance Time Series Forecasting Framework (Version 0.5.0)
2022
fitPS : Fit Zeta Distributions to Forensic Data (Version 1.0.1)
2022
fitPoly : Genotype Calling for Bi-Allelic Marker Assays (Version 3.0.0)
2018
flintyR : Simple and Flexible Tests of Sample Exchangeability (Version 0.1.0)
2021
florabr : Explore Flora e Funga do Brasil Database (Version 1.3.0)
2023
flowml : A Backend for a 'nextflow' Pipeline that Performs Machine-Learning-Based Modeling of Biomedical Data (Version 0.1.3)
2023
fnets : Factor-Adjusted Network Estimation and Forecasting for High-Dimensional Time Series (Version 0.1.6)
2023
forecastHybrid : Convenient Functions for Ensemble Time Series Forecasts (Version 5.0.19)
2016
forensIT : Information Theory Tools for Forensic Analysis (Version 1.0.0)
2023
fsemipar : Estimation, Variable Selection and Prediction for Functional Semiparametric Models (Version 1.1.1)
2023
funData : An S4 Class for Functional Data (Version 1.3-9)
2016
funGp : Gaussian Process Models for Scalar and Functional Inputs (Version 1.0.0)
2020
fuzzyforest : Fuzzy Forests (Version 1.0.8)
2016
fxTWAPLS : An Improved Version of WA-PLS (Version 0.1.3)
2020
fxregime : Exchange Rate Regime Analysis (Version 1.0-4)
2007
gam : Generalized Additive Models (Version 1.22-5)
2004
gamCopula : Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas (Version 0.0-7)
2017
gambin : Fit the Gambin Model to Species Abundance Distributions (Version 2.5.0)
2013
gamlss.foreach : Parallel Computations for Distributional Regression (Version 1.1-6)
2021
gamlss.ggplots : Plotting Functions for Generalized Additive Model for Location Scale and Shape (Version 2.1-12)
2022
gamreg : Robust and Sparse Regression via Gamma-Divergence (Version 0.3)
2016
gamsel : Fit Regularization Path for Generalized Additive Models (Version 1.8-5)
2015
gapclosing : Estimate Gaps Under an Intervention (Version 1.0.2)
2021
gapfill : Fill Missing Values in Satellite Data (Version 0.9.6-1)
2016
gbts : Hyperparameter Search for Gradient Boosted Trees (Version 1.2.0)
2016
gdm : Generalized Dissimilarity Modeling (Version 1.6.0-3)
2015
gdpc : Generalized Dynamic Principal Components (Version 1.1.4)
2016
geeVerse : A Comprehensive Analysis of High Dimensional Longitudinal Data (Version 0.2.1)
2024
genlogis : Generalized Logistic Distribution (Version 1.0.2)
2017
geoTS : Methods for Handling and Analyzing Time Series of Satellite Images (Version 0.1.8)
2020
gestate : Generalised Survival Trial Assessment Tool Environment (Version 1.6.0)
2019
gfiExtremes : Generalized Fiducial Inference for Extremes (Version 1.0.1)
2020
ggroups : Pedigree and Genetic Groups (Version 2.1.2)
2019
glmm : Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation (Version 1.4.5)
2015
glmnet : Lasso and Elastic-Net Regularized Generalized Linear Models (Version 4.1-8)
2008
glmtlp : Generalized Linear Models with Truncated Lasso Penalty (Version 2.0.2)
2018
glmtrans : Transfer Learning under Regularized Generalized Linear Models (Version 2.0.0)
2021
gmDatabase : Accessing a Geometallurgical Database with R (Version 0.5.0)
2016
gmGeostats : Geostatistics for Compositional Analysis (Version 0.11.3)
2020
gmtFD : General Multiple Tests for Univariate and Multivariate Functional Data (Version 0.1.0)
2024
gofCopula : Goodness-of-Fit Tests for Copulae (Version 0.4-1)
2015
gpmap : Analysing and Plotting Genotype-Phenotype Maps (Version 0.1.2)
2013
graphicalEvidence : Graphical Evidence (Version 1.1)
2024
gratis : Generating Time Series with Diverse and Controllable Characteristics (Version 1.0.7)
2020
greybox : Toolbox for Model Building and Forecasting (Version 2.0.2)
2018
groupedSurv : Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function (Version 1.0.5.1)
2018
growthcleanr : Data Cleaner for Anthropometric Measurements (Version 2.2.0)
2022
gsbm : Estimate Parameters in the Generalized SBM (Version 0.2.2)
2020
gscaLCA : Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression (Version 0.0.5)
2019
gsrs : A Group-Specific Recommendation System (Version 0.1.1)
2021
gsynth : Generalized Synthetic Control Method (Version 1.2.1)
2017
handwriter : Handwriting Analysis in R (Version 3.2.1)
2021
hdbinseg : Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation (Version 1.0.2)
2018
hdcuremodels : Penalized Mixture Cure Models for High-Dimensional Data (Version 0.0.1)
2024
hdmed : Methods for Mediation Analysis with High-Dimensional Mediators (Version 1.0.1)
2023
hdnom : Benchmarking and Visualization Toolkit for Penalized Cox Models (Version 6.0.4)
2015
heterocop : Semi-Parametric Estimation with Gaussian Copula (Version 0.1.0.0)
2024
hettx : Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation (Version 0.1.3)
2019
highd2means : High-Dimensional Tests for Two Population Mean Vectors (Version 1.0)
2024
hindex : Simulating the Development of h-Index Values (Version 0.2.0)
2019
hlt : Higher-Order Item Response Theory (Version 1.3.1)
2022
hscovar : Calculation of Covariance Between Markers for Half-Sib Families (Version 0.4.2)
2020
hwep : Hardy-Weinberg Equilibrium in Polyploids (Version 2.0.2)
2021
hybridModels : An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks (Version 0.3.7)
2016
hyperbolicDEA : Hyperbolic DEA Estimation (Version 1.0.0)
2024
hypervolume : High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls (Version 3.1.4)
2013
iBART : Iterative Bayesian Additive Regression Trees Descriptor Selection Method (Version 1.0.0)
2023
iIneq : Computing Individual Components of the Gini and the Theil Indices (Version 1.0.2)
2020
iZID : Identify Zero-Inflated Distributions (Version 0.0.1)
2019
icardaFIGSr : Subsetting using Focused Identification of the Germplasm Strategy (FIGS) (Version 1.0.2)
2021
iccTraj : Estimates the Intraclass Correlation Coefficient for Trajectory Data (Version 1.0.4)
2023
icenReg : Regression Models for Interval Censored Data (Version 2.0.16)
2015
ihclust : Iterative Hierarchical Clustering (IHC) (Version 0.1.0)
2022
imabc : Incremental Mixture Approximate Bayesian Computation (IMABC) (Version 1.0.0)
2021
imageseg : Deep Learning Models for Image Segmentation (Version 0.5.0)
2021
imanr : Identify the Racial Complex of Native Corns from Mexico (Version 1.0.2)
2024
inctools : Incidence Estimation Tools (Version 1.0.15)
2016
inferCSN : Inferring Cell-Specific Gene Regulatory Network (Version 1.0.8)
2023
influential : Identification and Classification of the Most Influential Nodes (Version 2.2.9)
2020
intamap : Procedures for Automated Interpolation (Version 1.5-7)
2009
intccr : Semiparametric Competing Risks Regression under Interval Censoring (Version 3.0.4)
2017
integIRTy : Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory (Version 1.0.7)
2017
interflex : Multiplicative Interaction Models Diagnostics and Visualization (Version 1.2.6)
2017
intkrige : A Numerical Implementation of Interval-Valued Kriging (Version 1.0.1)
2019
intmed : Mediation Analysis using Interventional Effects (Version 0.1.2)
2020
iprior : Regression Modelling using I-Priors (Version 0.7.4)
2016
isoWater : Discovery, Retrieval, and Analysis of Water Isotope Data (Version 1.2.0)
2021
isocat : Isotope Origin Clustering and Assignment Tools (Version 0.3.0)
2019
iterators : Provides Iterator Construct (Version 1.0.14)
2009
iterors : Fast, Compact Iterators and Tools (Version 1.0)
2023
iterpc : Efficient Iterator for Permutations and Combinations (Version 0.4.2)
2014
itertools : Iterator Tools (Version 0.1-3)
2010
ivDiag : Estimation and Diagnostic Tools for Instrumental Variables Designs (Version 1.0.6)
2023
jSDM : Joint Species Distribution Models (Version 0.2.6)
2019
jackknifeR : Delete-d Jackknife for Point and Interval Estimation (Version 1.2.0)
2022
jackstrap : Correcting Nonparametric Frontier Measurements for Outliers (Version 0.1.0)
2020
joineRML : Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes (Version 0.4.6)
2016
jrSiCKLSNMF : Multimodal Single-Cell Omics Dimensionality Reduction (Version 1.2.1)
2023
kcpRS : Kernel Change Point Detection on the Running Statistics (Version 1.1.1)
2019
kdevine : Multivariate Kernel Density Estimation with Vine Copulas (Version 0.4.5)
2017
kdry : K's "Don't Repeat Yourself"-Collection (Version 0.0.2)
2023
kergp : Gaussian Process Laboratory (Version 0.5.7)
2015
kernelshap : Kernel SHAP (Version 0.7.0)
2022
kernhaz : Kernel Estimation of Hazard Function in Survival Analysis (Version 0.1.0)
2018
kfa : K-Fold Cross Validation for Factor Analysis (Version 0.2.2)
2021
kfino : Kalman Filter for Impulse Noised Outliers (Version 1.0.0)
2022
kko : Kernel Knockoffs Selection for Nonparametric Additive Models (Version 1.0.1)
2022
kmBlock : k-Means Like Blockmodeling of One-Mode and Linked Networks (Version 0.1.2)
2023
knnp : Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel) (Version 2.0.0)
2018
kselection : Selection of K in K-Means Clustering (Version 0.2.1)
2014
landsepi : Landscape Epidemiology and Evolution (Version 1.5.1)
2018
latentcor : Fast Computation of Latent Correlations for Mixed Data (Version 2.0.1)
2021
latrend : A Framework for Clustering Longitudinal Data (Version 1.6.1)
2020
lavaSearch2 : Tools for Model Specification in the Latent Variable Framework (Version 2.0.3)
2018
lboxcox : Implementation of Logistic Box-Cox Regression (Version 1.2)
2022
lcc : Longitudinal Concordance Correlation (Version 1.1.4)
2018
ldamatch : Selection of Statistically Similar Research Groups (Version 1.0.3)
2015
ldsep : Linkage Disequilibrium Shrinkage Estimation for Polyploids (Version 2.1.5)
2020
ldsr : Linear Dynamical System Reconstruction (Version 0.0.2)
2020
leakyIV : Leaky Instrumental Variables (Version 0.0.1)
2024
leastcostpath : Modelling Pathways and Movement Potential Within a Landscape (Version 2.0.12)
2020
legion : Forecasting Using Multivariate Models (Version 0.1.2)
2021
lfl : Linguistic Fuzzy Logic (Version 2.2.1)
2015
lfmm : Latent Factor Mixed Models (Version 1.1)
2020
limorhyde : Differential Analysis of Rhythmic Transcriptome Data (Version 1.0.1)
2022
limorhyde2 : Quantify Rhythmicity and Differential Rhythmicity in Genomic Data (Version 0.1.0)
2022
lmeresampler : Bootstrap Methods for Nested Linear Mixed-Effects Models (Version 0.2.4)
2016
lnmCluster : Perform Logistic Normal Multinomial Clustering for Microbiome Compositional Data (Version 0.3.1)
2022
localgauss : Estimating Local Gaussian Parameters (Version 0.41)
2012
logiBin : Binning Variables to Use in Logistic Regression (Version 0.3)
2017
lpirfs : Local Projections Impulse Response Functions (Version 0.2.3)
2018
lqmix : Linear Quantile Mixture Models (Version 1.0)
2023
lsbclust : Least-Squares Bilinear Clustering for Three-Way Data (Version 1.1)
2015
mSTEM : Multiple Testing of Local Extrema for Detection of Change Points (Version 1.0-1)
2019
mSimCC : Micro Simulation Model for Cervical Cancer Prevention (Version 0.0.3)
2019
mable : Maximum Approximate Bernstein/Beta Likelihood Estimation (Version 4.1.1)
2018
marqLevAlg : A Parallelized General-Purpose Optimization Based on Marquardt-Levenberg Algorithm (Version 2.0.8)
2012
matchFeat : One-to-One Feature Matching (Version 1.0)
2022
mazeinda : Monotonic Association on Zero-Inflated Data (Version 0.0.2)
2018
mbest : Moment-Based Estimation for Hierarchical Models (Version 0.6)
2014
mcgf : Markov Chain Gaussian Fields Simulation and Parameter Estimation (Version 1.1.1)
2023
mclustAddons : Addons for the 'mclust' Package (Version 0.9)
2021
mcmsupply : Estimating Public and Private Sector Contraceptive Market Supply Shares (Version 1.1.1)
2023
merTools : Tools for Analyzing Mixed Effect Regression Models (Version 0.6.2)
2015
metadeconfoundR : Covariate-Sensitive Analysis of Cross-Sectional High-Dimensional Data (Version 1.0.2)
2024
metaplus : Robust Meta-Analysis and Meta-Regression (Version 1.0-5)
2014
meteo : RFSI & STRK Interpolation for Meteo and Environmental Variables (Version 2.0-3)
2015
metsyn : Interface with the Meteo France Synop Data API (Version 0.1.2)
2018
mevr : Fitting the Metastatistical Extreme Value Distribution MEVD (Version 1.1.1)
2024
mgwrsar : GWR and MGWR with Spatial Autocorrelation (Version 1.0.5)
2018
mi4p : Multiple Imputation for Proteomics (Version 1.2)
2021
miceRanger : Multiple Imputation by Chained Equations with Random Forests (Version 1.5.0)
2020
midasml : Estimation and Prediction Methods for High-Dimensional Mixed Frequency Time Series Data (Version 0.1.10)
2020
mikropml : User-Friendly R Package for Supervised Machine Learning Pipelines (Version 1.6.1)
2020
mimi : Main Effects and Interactions in Mixed and Incomplete Data (Version 0.2.0)
2019
misclassGLM : Computation of Generalized Linear Models with Misclassified Covariates Using Side Information (Version 0.3.5)
2016
missForest : Nonparametric Missing Value Imputation using Random Forest (Version 1.5)
2011
missMDA : Handling Missing Values with Multivariate Data Analysis (Version 1.19)
2010
misspi : Missing Value Imputation in Parallel (Version 0.1.0)
2023
mistral : Methods in Structural Reliability (Version 2.2.2)
2013
mixvlmc : Variable Length Markov Chains with Covariates (Version 0.2.1)
2023
mlrv : Long-Run Variance Estimation in Time Series Regression (Version 0.1.2)
2023
mmb : Arbitrary Dependency Mixed Multivariate Bayesian Models (Version 0.13.3)
2020
mnet : Modeling Group Differences and Moderation Effects in Statistical Network Models (Version 0.1.2)
2023
moc.gapbk : Multi-Objective Clustering Algorithm Guided by a-Priori Biological Knowledge (Version 0.1.3)
2019
modACDC : Association of Covariance for Detecting Differential Co-Expression (Version 2.0.1)
2023
modeltime.ensemble : Ensemble Algorithms for Time Series Forecasting with Modeltime (Version 1.0.4)
2020
modeltime : The Tidymodels Extension for Time Series Modeling (Version 1.3.1)
2020
moderate.mediation : Causal Moderated Mediation Analysis (Version 0.0.10)
2023
momentuHMM : Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models (Version 1.5.5)
2017
monoClust : Perform Monothetic Clustering with Extensions to Circular Data (Version 1.2.1)
2020
mop : Mobility Oriented-Parity Metric (Version 0.1.2)
2023
moreparty : A Toolbox for Conditional Inference Trees and Random Forests (Version 0.4)
2020
mpath : Regularized Linear Models (Version 0.4-2.26)
2014
mplot : Graphical Model Stability and Variable Selection Procedures (Version 1.0.6)
2015
mpower : Power Analysis via Monte Carlo Simulation for Correlated Data (Version 0.1.0)
2022
mrMLM.GUI : Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface (Version 4.0.2)
2018
mrMLM : Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS (Version 5.0.1)
2016
msaenet : Multi-Step Adaptive Estimation Methods for Sparse Regressions (Version 3.1.2)
2016
msm : Multi-State Markov and Hidden Markov Models in Continuous Time (Version 1.8.2)
2002
mstherm : Analyze MS/MS Protein Melting Data (Version 0.4.7)
2017
mtlgmm : Unsupervised Multi-Task and Transfer Learning on Gaussian Mixture Models (Version 0.1.0)
2022
multiApply : Apply Functions to Multiple Multidimensional Arrays or Vectors (Version 2.1.4)
2017
multiFANOVA : Multiple Contrast Tests for Functional Data (Version 0.1.0)
2023
multilevLCA : Estimates and Plots Single-Level and Multilevel Latent Class Models (Version 1.5.2)
2023
multilevelcoda : Estimate Bayesian Multilevel Models for Compositional Data (Version 1.3.0.2)
2023
multinomialLogitMix : Clustering Multinomial Count Data under the Presence of Covariates (Version 1.1)
2022
mutSignatures : Decipher Mutational Signatures from Somatic Mutational Catalogs (Version 2.1.1)
2017
mvMAPIT : Multivariate Genome Wide Marginal Epistasis Test (Version 2.0.3)
2022
mvhtests : Multivariate Hypothesis Tests (Version 1.0)
2023
mvs : Methods for High-Dimensional Multi-View Learning (Version 2.0.0)
2023
nebula : Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data (Version 1.5.3)
2022
nestedcv : Nested Cross-Validation with 'glmnet' and 'caret' (Version 0.7.10)
2022
nestedmodels : Tidy Modelling for Nested Data (Version 1.1.0)
2022
netcom : NETwork COMparison Inference (Version 2.1.7)
2017
nett : Network Analysis and Community Detection (Version 1.0.0)
2022
neuroim : Data Structures and Handling for Neuroimaging Data (Version 0.0.6)
2014
nimbleCarbon : Bayesian Analyses of Radiocarbon Dates with NIMBLE (Version 0.2.5)
2021
nlstac : An R Package for Fitting Separable Nonlinear Models (Version 0.2.0)
2020
noisyr : Noise Quantification in High Throughput Sequencing Output (Version 1.0.0)
2021
nonprobsvy : Inference Based on Non-Probability Samples (Version 0.1.0)
2024
npcs : Neyman-Pearson Classification via Cost-Sensitive Learning (Version 0.1.1)
2021
npcurePK : Mixture Cure Model Estimation with Cure Status Partially Known (Version 1.0-2)
2023
npregfast : Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions (Version 1.5.2)
2015
nprotreg : Nonparametric Rotations for Sphere-Sphere Regression (Version 1.1.1)
2018
oem : Orthogonalizing EM: Penalized Regression for Big Tall Data (Version 2.0.12)
2012
opGMMassessment : Optimized Automated Gaussian Mixture Assessment (Version 0.4)
2021
opdisDownsampling : Optimal Distribution Preserving Down-Sampling of Bio-Medical Data (Version 1.0.1)
2021
optiSel : Optimum Contribution Selection and Population Genetics (Version 2.0.9)
2016
ormBigData : Fitting Semiparametric Cumulative Probability Models for Big Data (Version 0.0.1)
2021
otrimle : Robust Model-Based Clustering (Version 2.0)
2016
pGRN : Single-Cell RNA Sequencing Pseudo-Time Based Gene Regulatory Network Inference (Version 0.3.5)
2023
pRecipe : Precipitation R Recipes (Version 3.0.1-3)
2021
packMBPLSDA : Multi-Block Partial Least Squares Discriminant Analysis (Version 0.9.0)
2019
paleoTS : Analyze Paleontological Time-Series (Version 0.6.2)
2006
parafac4microbiome : Parallel Factor Analysis Modelling of Longitudinal Microbiome Data (Version 1.0.3)
2024
paramsim : Parameterized Simulation (Version 0.1.0)
2023
parseRPDR : Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries (Version 1.1.1)
2021
pathfindR : Enrichment Analysis Utilizing Active Subnetworks (Version 2.4.1)
2018
pbo : Probability of Backtest Overfitting (Version 1.3.5)
2014
pchc : Bayesian Network Learning with the PCHC and Related Algorithms (Version 1.2)
2020
pctax : Professional Comprehensive Omics Data Analysis (Version 0.1.1)
2024
pcutils : Some Useful Functions for Statistics and Visualization (Version 0.2.6)
2023
pdp : Partial Dependence Plots (Version 0.8.2)
2016
pec : Prediction Error Curves for Risk Prediction Models in Survival Analysis (Version 2023.04.12)
2008
pemultinom : L1-Penalized Multinomial Regression with Statistical Inference (Version 0.1.0)
2023
pencal : Penalized Regression Calibration (PRC) for the Dynamic Prediction of Survival (Version 2.2.2)
2020
pencopulaCond : Estimating Non-Simplified Vine Copulas Using Penalized Splines (Version 0.2)
2017
perms : Fast Permutation Computation (Version 1.14)
2023
personalized : Estimation and Validation Methods for Subgroup Identification and Personalized Medicine (Version 0.2.7)
2017
personalized2part : Two-Part Estimation of Treatment Rules for Semi-Continuous Data (Version 0.0.1)
2020
perspectev : Permutation of Species During Turnover Events (Version 1.1)
2015
phenex : Auxiliary Functions for Phenological Data Analysis (Version 1.4-5)
2013
phenopix : Process Digital Images of a Vegetation Cover (Version 2.4.4)
2017
phers : Calculate Phenotype Risk Scores (Version 1.0.2)
2022
phytools : Phylogenetic Tools for Comparative Biology (and Other Things) (Version 2.3-0)
2011
pksensi : Global Sensitivity Analysis in Physiologically Based Kinetic Modeling (Version 1.2.3)
2018
plasso : Cross-Validated (Post-) Lasso (Version 0.1.2)
2023
pliman : Tools for Plant Image Analysis (Version 3.0.0)
2021
plnr : A System for Planing Analyses (Version 2022.11.23)
2022
plyr : Tools for Splitting, Applying and Combining Data (Version 1.8.9)
2008
pmartR : Panomics Marketplace - Quality Control and Statistical Analysis for Panomics Data (Version 2.4.6)
2023
pmparser : Create and Maintain a Relational Database of Data from PubMed/MEDLINE (Version 1.0.20)
2022
poems : Pattern-Oriented Ensemble Modeling System (Version 1.3.1)
2021
polymapR : Linkage Analysis in Outcrossing Polyploids (Version 1.1.6)
2017
polypharmacy : Calculate Several Polypharmacy Indicators (Version 1.0.0)
2021
polyqtlR : QTL Analysis in Autopolyploid Bi-Parental F1 Populations (Version 0.1.1)
2020
polywog : Bootstrapped Basis Regression with Oracle Model Selection (Version 0.4-1)
2012
pomdp : Infrastructure for Partially Observable Markov Decision Processes (POMDP) (Version 1.2.3)
2018
poolABC : Approximate Bayesian Computation with Pooled Sequencing Data (Version 1.0.0)
2023
poolfstat : Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data (Version 2.2.0)
2018
potential : Implementation of the Potential Model (Version 0.2.0)
2020
powerPLS : Power Analysis for PLS Classification (Version 0.2.0)
2024
pre : Prediction Rule Ensembles (Version 1.0.7)
2016
predhy.GUI : Genomic Prediction of Hybrid Performance with Graphical User Interface (Version 2.0.1)
2023
predhy : Genomic Prediction of Hybrid Performance (Version 2.1.1)
2019
primerTree : Visually Assessing the Specificity and Informativeness of Primer Pairs (Version 1.0.6)
2013
productivity : Indices of Productivity Using Data Envelopment Analysis (DEA) (Version 1.1.0)
2016
progressr : An Inclusive, Unifying API for Progress Updates (Version 0.15.0)
2020
projpred : Projection Predictive Feature Selection (Version 2.8.0)
2018
prospectr : Miscellaneous Functions for Processing and Sample Selection of Spectroscopic Data (Version 0.2.7)
2013
protr : Generating Various Numerical Representation Schemes for Protein Sequences (Version 1.7-4)
2012
psborrow : Bayesian Dynamic Borrowing with Propensity Score (Version 0.2.1)
2021
psgp : Projected Spatial Gaussian Process Methods (Version 0.3-21)
2009
qtlpoly : Random-Effect Multiple QTL Mapping in Autopolyploids (Version 0.2.4)
2021
quickNmix : Asymptotic N-Mixture Model Fitting (Version 1.1.1)
2021
rBayesianOptimization : Bayesian Optimization of Hyperparameters (Version 1.2.1)
2016
rENA : Epistemic Network Analysis (Version 0.2.7)
2017
rSHAPE : Simulated Haploid Asexual Population Evolution (Version 0.3.2)
2019
rSPDE : Rational Approximations of Fractional Stochastic Partial Differential Equations (Version 2.3.3)
2019
ramsvm : Reinforced Angle-Based Multicategory Support Vector Machines (Version 2.3)
2016
randomGLM : Random General Linear Model Prediction (Version 1.10-1)
2013
randomLCA : Random Effects Latent Class Analysis (Version 1.1-4)
2008
randomUniformForest : Random Uniform Forests for Classification, Regression and Unsupervised Learning (Version 1.1.6)
2014
rapidsplithalf : A Fast Split-Half Reliability Algorithm (Version 0.3)
2024
rassta : Raster-Based Spatial Stratification Algorithms (Version 1.0.6)
2021
rasterdiv : Diversity Indices for Numerical Matrices (Version 0.3.6)
2020
rayshader : Create Maps and Visualize Data in 2D and 3D (Version 0.37.3)
2018
rcarbon : Calibration and Analysis of Radiocarbon Dates (Version 1.5.1)
2017
rcontroll : Individual-Based Forest Growth Simulator 'TROLL' (Version 0.1.2)
2023
rechaRge : HydroBudget – Groundwater Recharge Model (Version 1.0.0)
2024
reddPrec : Reconstruction of Daily Data - Precipitation (Version 2.0.3)
2016
redist : Simulation Methods for Legislative Redistricting (Version 4.2.0)
2015
redistmetrics : Redistricting Metrics (Version 1.0.7)
2021
refreg : Conditional Multivariate Reference Regions (Version 0.1.1)
2021
regDIF : Regularized Differential Item Functioning (Version 1.1.1)
2021
regRSM : Random Subspace Method (RSM) for Linear Regression (Version 0.5)
2014
regda : Regularised Discriminant Analysis (Version 1.0)
2023
relgam : Reluctant Generalized Additive Models (Version 1.0)
2020
rem : Relational Event Models (REM) (Version 1.3.1)
2016
remiod : Reference-Based Multiple Imputation for Ordinal/Binary Response (Version 1.0.2)
2022
remotePARTS : Spatiotemporal Autoregression Analyses for Large Data Sets (Version 1.0.4)
2023
representr : Create Representative Records After Entity Resolution (Version 0.1.5)
2020
resemble : Memory-Based Learning in Spectral Chemometrics (Version 2.2.3)
2014
resilience : Predictors of Resilience to a Stressor in a Single-Arm Study (Version 2024.1.2)
2023
rgenius : Get 'Genius' API Lyrics (Version 0.1.0)
2020
riAFTBART : A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes (Version 0.3.3)
2022
rioja : Analysis of Quaternary Science Data (Version 1.0-7)
2009
riskRegression : Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks (Version 2023.12.21)
2011
riskscores : Optimized Integer Risk Score Models (Version 1.1.1)
2023
riverconn : Fragmentation and Connectivity Indices for Riverscapes (Version 0.3.31)
2022
rlfsm : Simulations and Statistical Inference for Linear Fractional Stable Motions (Version 1.1.2)
2018
rlibkriging : Kriging Models using the 'libKriging' Library (Version 0.9-0.4)
2022
rmfanova : Repeated Measures Functional Analysis of Variance (Version 0.1.0)
2023
rnaCrosslinkOO : Analysis of RNA Crosslinking Data (Version 0.1.4)
2024
robmixglm : Robust Generalized Linear Models (GLM) using Mixtures (Version 1.2-4)
2018
robust2sls : Outlier Robust Two-Stage Least Squares Inference and Testing (Version 0.2.2)
2021
robustBLME : Robust Bayesian Linear Mixed-Effects Models using ABC (Version 0.1.3)
2017
robustbase : Basic Robust Statistics (Version 0.99-4-1)
2006
robustrao : An Extended Rao-Stirling Diversity Index to Handle Missing Data (Version 1.0-5)
2016
rpm : Modeling of Revealed Preferences Matchings (Version 0.7-3)
2023
rrepast : Invoke 'Repast Simphony' Simulation Models (Version 0.8.0)
2015
rsides : SIDES-Based Subgroup Search Algorithms (Version 0.1)
2024
rsppfp : R's Shortest Path Problem with Forbidden Subpaths (Version 1.0.4)
2018
runexp : Softball Run Expectancy using Markov Chains and Simulation (Version 0.2.1)
2021
s4vd : Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection (Version 1.1-1)
2011
sMSROC : Assessment of Diagnostic and Prognostic Markers (Version 0.1.2)
2022
sRDA : Sparse Redundancy Analysis (Version 1.0.0)
2017
santaR : Short Asynchronous Time-Series Analysis (Version 1.2.4)
2018
sars : Fit and Compare Species-Area Relationship Models Using Multimodel Inference (Version 1.3.7)
2018
scBio : Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data (Version 0.1.6)
2018
scDHA : Single-Cell Decomposition using Hierarchical Autoencoder (Version 1.2.2)
2021
scRNAtools : Single Cell RNA Sequencing Data Analysis Tools (Version 1.0)
2018
scanstatistics : Space-Time Anomaly Detection using Scan Statistics (Version 1.1.1)
2016
scoper : Spectral Clustering-Based Method for Identifying B Cell Clones (Version 1.3.0)
2018
scorecard : Credit Risk Scorecard (Version 0.4.4)
2017
scpi : Prediction Intervals for Synthetic Control Methods with Multiple Treated Units and Staggered Adoption (Version 2.2.5)
2022
seeker : Simplified Fetching and Processing of Microarray and RNA-Seq Data (Version 1.1.6)
2022
segMGarch : Multiple Change-Point Detection for High-Dimensional GARCH Processes (Version 1.2)
2018
segmentr : Segment Data With Maximum Likelihood (Version 0.2.0)
2019
segtest : Tests for Segregation Distortion in Polyploids (Version 1.0.1)
2024
selfingTree : Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing (Version 0.2)
2014
semPower : Power Analyses for SEM (Version 2.1.1)
2018
semsfa : Semiparametric Estimation of Stochastic Frontier Models (Version 1.1)
2015
semverutils : Semantic Version Utilities (Version 0.1.0)
2020
sensitivity : Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)
2006
sentometrics : An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction (Version 1.0.0)
2017
sephora : Statistical Estimation of Phenological Parameters (Version 0.1.31)
2024
seqimpute : Imputation of Missing Data in Sequence Analysis (Version 2.0.0)
2022
seriation : Infrastructure for Ordering Objects Using Seriation (Version 1.5.6)
2007
serocalculator : Estimating Infection Rates from Serological Data (Version 1.0.3)
2024
sgsR : Structurally Guided Sampling (Version 1.4.5)
2022
shazam : Immunoglobulin Somatic Hypermutation Analysis (Version 1.2.0)
2016
simDAG : Simulate Data from a DAG and Associated Node Information (Version 0.2.0)
2023
simMP : Simulate Somatic Mutations in Cancer Genomes from Mutational Processes (Version 0.17.3)
2017
simPop : Simulation of Complex Synthetic Data Information (Version 2.1.3)
2014
simphony : Simulating Large-Scale, Rhythmic Data (Version 1.0.3)
2022
simsalapar : Tools for Simulation Studies in Parallel (Version 1.0-12)
2013
simtrial : Clinical Trial Simulation (Version 0.4.1)
2023
singleRcapture : Single-Source Capture-Recapture Models (Version 0.2.1.2)
2023
sivs : Stable Iterative Variable Selection (Version 0.2.10)
2020
skewMLRM : Estimation for Scale-Shape Mixtures of Skew-Normal Distributions (Version 1.6)
2021
skipTrack : A Bayesian Hierarchical Model that Controls for Non-Adherence in Mobile Menstrual Cycle Tracking (Version 0.1.0)
2024
skpr : Design of Experiments Suite: Generate and Evaluate Optimal Designs (Version 1.7.1)
2017
skyscapeR : Data Analysis and Visualization for Skyscape Archaeology (Version 1.0.0)
2017
smacof : Multidimensional Scaling (Version 2.1-7)
2008
smam : Statistical Modeling of Animal Movements (Version 0.7.2)
2013
smartsnp : Fast Multivariate Analyses of Big Genomic Data (Version 1.1.0)
2021
smooth : Forecasting Using State Space Models (Version 4.1.0)
2016
sms : Spatial Microsimulation (Version 2.3.1)
2012
snpAIMeR : Assess the Diagnostic Power of Genomic Marker Combinations (Version 2.1.1)
2023
soundgen : Sound Synthesis and Acoustic Analysis (Version 2.7.1)
2017
spAbundance : Univariate and Multivariate Spatial Modeling of Species Abundance (Version 0.2.1)
2023
spBPS : Bayesian Predictive Stacking for Scalable Geospatial Transfer Learning (Version 0.0-4)
2024
spOccupancy : Single-Species, Multi-Species, and Integrated Spatial Occupancy Models (Version 0.7.6)
2021
spaMM : Mixed-Effect Models, with or without Spatial Random Effects (Version 4.5.0)
2013
sparklyr : R Interface to Apache Spark (Version 1.8.6)
2016
sparr : Spatial and Spatiotemporal Relative Risk (Version 2.3-15)
2010
sparrpowR : Power Analysis to Detect Spatial Relative Risk Clusters (Version 0.2.8)
2020
spatPomp : Inference for Spatiotemporal Partially Observed Markov Processes (Version 0.36.1)
2021
spatialRF : Easy Spatial Modeling with Random Forest (Version 1.1.4)
2021
speaq : Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations (Version 2.7.0)
2015
spectr : Calculate the Periodogram of a Time-Course (Version 1.0.1)
2022
sperich : Auxiliary Functions to Estimate Centers of Biodiversity (Version 1.5-9)
2011
sphunif : Uniformity Tests on the Circle, Sphere, and Hypersphere (Version 1.4.0)
2021
splitSelect : Best Split Selection Modeling for Low-Dimensional Data (Version 1.0.3)
2020
spmoran : Fast Spatial and Spatio-Temporal Regression using Moran Eigenvectors (Version 0.3.1)
2017
ss3sim : Fisheries Stock Assessment Simulation Testing with Stock Synthesis (Version 1.0.3)
2014
ssMRCD : Spatially Smoothed MRCD Estimator (Version 1.1.0)
2023
ssdtools : Species Sensitivity Distributions (Version 2.1.0)
2018
stR : Seasonal Trend Decomposition Using Regression (Version 0.7)
2016
sta : Seasonal Trend Analysis for Time Series Imagery in R (Version 0.1.7)
2021
staRdom : PARAFAC Analysis of EEMs from DOM (Version 1.1.28)
2018
stablespec : Stable Specification Search in Structural Equation Models (Version 0.3.0)
2016
stacks : Tidy Model Stacking (Version 1.0.5)
2020
starvars : Vector Logistic Smooth Transition Models Estimation and Prediction (Version 1.1.10)
2020
statGraph : Statistical Methods for Graphs (Version 1.0.6)
2017
statgenMPP : QTL Mapping for Multi Parent Populations (Version 1.0.3)
2022
statgenQTLxT : Multi-Trait and Multi-Trial Genome Wide Association Studies (Version 1.0.2)
2023
steps : Spatially- and Temporally-Explicit Population Simulator (Version 1.3.0)
2019
stfit : Spatio-Temporal Functional Imputation Tool (Version 0.99.9)
2020
stgam : Spatially and Temporally Varying Coefficient Models Using Generalized Additive Models (Version 0.0.1.2)
2024
strucchange : Testing, Monitoring, and Dating Structural Changes (Version 1.5-4)
2001
strucchangeRcpp : Testing, Monitoring, and Dating Structural Changes: C++ Version (Version 1.5-4-1.0.0)
2021
sts : Estimation of the Structural Topic and Sentiment-Discourse Model for Text Analysis (Version 1.1)
2024
sureLDA : A Novel Multi-Disease Automated Phenotyping Method for the EHR (Version 0.1.0-1)
2020
survSNP : Power Calculations for SNP Studies with Censored Outcomes (Version 0.26)
2012
survidm : Inference and Prediction in an Illness-Death Model (Version 1.3.2)
2017
survstan : Fitting Survival Regression Models via 'Stan' (Version 0.0.7.1)
2023
swag : Sparse Wrapper Algorithm (Version 0.1.0)
2020
tableschema.r : Table Schema 'Frictionless Data' (Version 1.1.2)
2018
tclust : Robust Trimmed Clustering (Version 2.0-5)
2010
tehtuner : Fit and Tune Models to Detect Treatment Effect Heterogeneity (Version 0.3.0)
2022
telefit : Estimation and Prediction for Remote Effects Spatial Process Models (Version 1.0.3)
2018
templateICAr : Estimate Brain Networks and Connectivity with ICA and Empirical Priors (Version 0.8.8)
2022
text2map : R Tools for Text Matrices, Embeddings, and Networks (Version 0.2.0)
2021
tidyclust : A Common API to Clustering (Version 0.2.3)
2022
tigger : Infers Novel Immunoglobulin Alleles from Sequencing Data (Version 1.1.0)
2016
tip : Bayesian Clustering Using the Table Invitation Prior (TIP) (Version 0.1.0)
2022
track2KBA : Identifying Important Areas from Animal Tracking Data (Version 1.1.2)
2021
trackeR : Infrastructure for Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices (Version 1.6.0)
2016
trackeRapp : Interface for the Analysis of Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices (Version 1.2)
2019
transfR : Transfer of Hydrograph from Gauged to Ungauged Catchments (Version 1.0.11)
2021
treedater : Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation (Version 0.5.0)
2018
treesliceR : To Slice Phylogenetic Trees and Infer Evolutionary Patterns Over Time (Version 1.0.2)
2023
truh : Two-Sample Nonparametric Testing Under Heterogeneity (Version 1.0.0)
2021
tsDyn : Nonlinear Time Series Models with Regime Switching (Version 11.0.5.2)
2006
tsensembler : Dynamic Ensembles for Time Series Forecasting (Version 0.1.0)
2017
tsmp : Time Series with Matrix Profile (Version 0.4.15)
2018
tune : Tidy Tuning Tools (Version 1.2.1)
2020
turboEM : A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms (Version 2021.1)
2011
ubiquity : PKPD, PBPK, and Systems Pharmacology Modeling Tools (Version 2.0.3)
2019
ukbtools : Manipulate and Explore UK Biobank Data (Version 0.11.3)
2017
unsystation : Stationarity Test Based on Unsystematic Sub-Sampling (Version 0.2.0)
2016
updog : Flexible Genotyping for Polyploids (Version 2.1.5)
2018
varTestnlme : Variance Components Testing for Linear and Nonlinear Mixed Effects Models (Version 1.3.5)
2020
varclust : Variables Clustering (Version 0.9.4)
2019
vardpoor : Variance Estimation for Sample Surveys by the Ultimate Cluster Method (Version 0.20.1)
2014
varitas : Variant Calling in Targeted Analysis Sequencing Data (Version 0.0.2)
2020
vectorwavelet : Vector Wavelet Coherence for Multiple Time Series (Version 0.1.0)
2021
vip : Variable Importance Plots (Version 0.4.1)
2018
viscomplexr : Phase Portraits of Functions in the Complex Number Plane (Version 1.1.1)
2020
vmeasur : Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope (Version 0.1.4)
2021
voiceR : Voice Analytics for Social Scientists (Version 0.1.0)
2023
weightQuant : Weights for Incomplete Longitudinal Data and Quantile Regression (Version 1.0.1)
2018
wflo : Data Set and Helper Functions for Wind Farm Layout Optimization Problems (Version 1.9)
2020
worldmet : Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD) (Version 0.9.8)
2017
wxgenR : A Stochastic Weather Generator with Seasonality (Version 1.4.2)
2023
xray : X Ray Vision on your Datasets (Version 0.2)
2017
xrnet : Hierarchical Regularized Regression (Version 1.0.0)
2020
yaConsensus : Consensus Clustering of Omic Data (Version 1.0)
2021
Showing 1-1055 of 1055
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