pegas: Population and Evolutionary Genetics Analysis System

Canonical link: https://rscholar.com/pkg/pegas

Emmanuel Paradis • Thibaut Jombart • Zhian N. Kamvar • Brian Knaus • Klaus Schliep • Alastair Potts • David Winter • View description and downloads View dependencies GitHub project

2009 Published

0 Citations

7 Authors

30 Revisions

1.4 Version

GPL-2 License

Referenced by ⇅	Year
HierDpart: Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems (Version 1.5.0)	2018
dartR: Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.9.5)	2017
HACSim: Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment (Version 1.0.7-1)	2019
PopGenReport: A Simple Framework to Analyse Population and Landscape Genetic Data (Version 3.1.3)	2012
geneHapR: Gene Haplotype Statistics, Phenotype Association and Visualization (Version 1.2.4)	2022
geneHapR Visualization: (Version )	0
PopGenReport Data: (Version )	0
RAINBOWR: Genome-Wide Association Study with SNP-Set Methods (Version 0.1.38)	2019
StAMPP: Statistical Analysis of Mixed Ploidy Populations (Version 1.6.3)	2013
adegenet: Exploratory Analysis of Genetic and Genomic Data (Version 2.1.11)	2007
dartR.base: Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 1.0.7)	2023
graph4lg: Build Graphs for Landscape Genetics Analysis (Version 1.8.0)	2019
hierfstat: Estimation and Tests of Hierarchical F-Statistics (Version 0.5-11)	2004
mmod: Modern Measures of Population Differentiation (Version 1.3.3)	2012
poppr: Genetic Analysis of Populations with Mixed Reproduction (Version 2.9.8)	2013
spider: Species Identity and Evolution in R (Version 1.5.1)	2011
wingen: Continuous Mapping of Genetic Diversity (Version 2.2.0)	2024

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