R Scholar logoR Package Scholar

Thibaut Jombart

27 Packages
Package ⇅ Year Total~Citation
adegenet: Exploratory Analysis of Genetic and Genomic Data (Version 2.1.10)Contributor

 		2007 32
adephylo: Exploratory Analyses for the Phylogenetic Comparative Method (Version 1.1-16)Contributor

 		2009 5
adespatial: Multivariate Multiscale Spatial Analysis (Version 0.3-24)Contributor

 		2016 6
apex: Phylogenetic Methods for Multiple Gene Data (Version 1.0.6)Contributor

 		2015 1
distcrete: Discrete Distribution Approximations (Version 1.0.3)Contributor

 		2017 5
earlyR: Estimation of Transmissibility in the Early Stages of a Disease Outbreak (Version 0.0.5)Maintainer

 		2017 0
epicontacts: Handling, Visualisation and Analysis of Epidemiological Contacts (Version 1.1.4)Contributor

 		2017 5
EpiEstim: Estimate Time Varying Reproduction Numbers from Epidemic Curves (Version 2.2-4)Contributor

 		2012 6
epiflows: Predicting Disease Spread from Flow Data (Version 0.2.1)Contributor

 		2018 0
epitrix: Small Helpers and Tricks for Epidemics Analysis (Version 0.4.0)Maintainer

 		2017 2
finalsize: Calculate the Final Size of an Epidemic (Version 0.2.1)Contributor

 		2022 0
hierfstat: Estimation and Tests of Hierarchical F-Statistics (Version 0.5-11)Contributor

 		2004 8
i2extras: Functions to Work with 'incidence2' Objects (Version 0.2.1)Contributor

 		2020 0
incidence: Compute, Handle, Plot and Model Incidence of Dated Events (Version 1.7.5)Contributor

 		2016 6
incidence2: Compute, Handle and Plot Incidence of Dated Events (Version 2.6.0)Contributor

 		2020 3
linelist: Tagging and Validating Epidemiological Data (Version 1.1.4)Contributor

 		2022 2
matchmaker: Flexible Dictionary-Based Cleaning (Version 0.1.1)Contributor

 		2020 1
o2geosocial: Reconstruction of Transmission Chains from Surveillance Data (Version 1.1.3)Contributor

 		2020 0
odin: ODE Generation and Integration (Version 1.2.6)Contributor

 		2019 0
outbreaker2: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data (Version 1.1.3)Contributor

 		2017 1
outbreaks: A Collection of Disease Outbreak Data (Version 1.9.0)Contributor

 		2016 14
pegas: Population and Evolutionary Genetics Analysis System (Version 1.3)Contributor

 		2009 15
projections: Project Future Case Incidence (Version 0.6.1)Maintainer

 		2017 1
reportfactory: Lightweight Infrastructure for Handling Multiple R Markdown Documents (Version 0.4.0)Contributor

 		2021 0
treespace: Statistical Exploration of Landscapes of Phylogenetic Trees (Version 1.1.4.3)Contributor

 		2017 0
trendeval: Evaluate Trending Models (Version 0.1.0)Maintainer

 		2020 0
trending: Model Temporal Trends (Version 0.1.0)Maintainer

 		2020 1

Popular co-authors (contributions)

tiago maié(1) . rich fitzjohn(4) . dirk schumacher(3) . rosalind eggo(1) . pratik gupte(1) . marie-pauline beugin(1) . isobel blake(1) . anne cori(5) . technology(1) . jake stockwin(1) . zhian n. kamvar(11) . alexis robert(2) . rolina van gaalen(1) . pierre nouvellet(3) . vladimir mikryukov(1) . juliet r.c. pulliam(2) . pavel dimens(1) . daniel borcard(1) . guillaume guenard(1) . eric archer(2) . brian knaus(1) . rebecca harris(1) . tim taylor(9) . elisabeth dahlqwist(1) . aurélie siberchicot(2) . nistara randhawa(1) . hugo gruson(2) . sangeeta bhatia(2) . rj ewing(1) . christophe fraser(1) . imperial college of science(1) . anders ellern bilgrau(1) . gerry tonkin-hill(1) . stéphane dray(2) . guillaume larocque(1) . pierre legendre(1) . klaus schliep(3) . brian j. knaus(1) . stephane ghozzi(1) . shikun li(1) . finlay campbell(3) . flavio finger(1) . zhian namir kamvar(1) . hélène h wagner(1) . p. alex demarsh(1) . frédéric michaud(1) . paula moraga(1) . robin thompson(1) . naima madi(1) . michelle kendall(1) . bertrand sudre(2) . lindsay v. clark(1) . neil m. ferguson(1) . caitlin collins(1) . steph locke(1) . edwin van leeuwen(1) . pawel piatkowski(1) . emmanuel paradis(1) . thomas crellen(1) . medicine(1) . adam kucharski(1) . guillaume blanchet(1) . janetta skarp(1) . chris hartgerink(1) . simon cauchemez(1) . vp nagraj(2) . libor morkovsky(1) . jun cai(1) . federico calboli(1) . jonathan a. polonsky(1) . simon frost(1) . justin lessler(1) . david bauman(1) . sylvie clappe(1) . caroline colijn(1) . sebastian funk(1) . eric brown(1) . jakob schumacher(2) . salla e. toikkanen(1) . patrick barks(1) . alexandre courtiol(1) . adam j kucharski(1) . joshua w. lambert(1) . olivier hardy(1) . charlie whittaker(1) . rebecca decamp(1) . peter solymos(1) . andree valle-campos(1) . roman lustrik(1) . ismail ahmed(1) . amy gimma(1) . david winter(1) . jacob almagro-garcia(1) . kristjan eldjarn(1) . jerome goudet(1) . sang woo park(1) . alastair potts(1) . 

RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN). Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.

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