R Scholar logoR Package Scholar

Thibaut Jombart

27 Packages
Package ⇅ Year Total~Citation
adegenet: Exploratory Analysis of Genetic and Genomic Data (Version 2.1.11)Contributor

 		2007 32
adephylo: Exploratory Analyses for the Phylogenetic Comparative Method (Version 1.1-16)Contributor

 		2009 5
adespatial: Multivariate Multiscale Spatial Analysis (Version 0.3-24)Contributor

 		2016 7
apex: Phylogenetic Methods for Multiple Gene Data (Version 1.0.6)Contributor

 		2015 1
distcrete: Discrete Distribution Approximations (Version 1.0.3)Contributor

 		2017 5
earlyR: Estimation of Transmissibility in the Early Stages of a Disease Outbreak (Version 0.0.5)Maintainer

 		2017 0
epicontacts: Handling, Visualisation and Analysis of Epidemiological Contacts (Version 1.1.4)Contributor

 		2017 5
EpiEstim: Estimate Time Varying Reproduction Numbers from Epidemic Curves (Version 2.2-4)Contributor

 		2012 6
epiflows: Predicting Disease Spread from Flow Data (Version 0.2.1)Contributor

 		2018 0
epitrix: Small Helpers and Tricks for Epidemics Analysis (Version 0.4.0)Maintainer

 		2017 2
finalsize: Calculate the Final Size of an Epidemic (Version 0.2.1)Contributor

 		2022 0
hierfstat: Estimation and Tests of Hierarchical F-Statistics (Version 0.5-11)Contributor

 		2004 8
i2extras: Functions to Work with 'incidence2' Objects (Version 0.2.1)Contributor

 		2020 0
incidence: Compute, Handle, Plot and Model Incidence of Dated Events (Version 1.7.5)Contributor

 		2016 6
incidence2: Compute, Handle and Plot Incidence of Dated Events (Version 2.6.0)Contributor

 		2020 3
linelist: Tagging and Validating Epidemiological Data (Version 1.1.4)Contributor

 		2022 2
matchmaker: Flexible Dictionary-Based Cleaning (Version 0.1.1)Contributor

 		2020 1
o2geosocial: Reconstruction of Transmission Chains from Surveillance Data (Version 1.1.3)Contributor

 		2020 0
odin: ODE Generation and Integration (Version 1.2.7)Contributor

 		2019 0
outbreaker2: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data (Version 1.1.3)Contributor

 		2017 1
outbreaks: A Collection of Disease Outbreak Data (Version 1.9.0)Contributor

 		2016 15
pegas: Population and Evolutionary Genetics Analysis System (Version 1.3)Contributor

 		2009 15
projections: Project Future Case Incidence (Version 0.6.1)Maintainer

 		2017 1
reportfactory: Lightweight Infrastructure for Handling Multiple R Markdown Documents (Version 0.4.0)Contributor

 		2021 0
treespace: Statistical Exploration of Landscapes of Phylogenetic Trees (Version 1.1.4.3)Contributor

 		2017 1
trendeval: Evaluate Trending Models (Version 0.1.0)Maintainer

 		2020 0
trending: Model Temporal Trends (Version 0.1.0)Maintainer

 		2020 1

Popular co-authors (contributions)

shikun li(1) . robin thompson(1) . jonathan a. polonsky(1) . rebecca harris(1) . amy gimma(1) . marie-pauline beugin(1) . pierre nouvellet(3) . david winter(1) . eric archer(2) . michelle kendall(1) . alexandre courtiol(1) . p. alex demarsh(1) . libor morkovsky(1) . medicine(1) . alexis robert(2) . sylvie clappe(1) . juliet r.c. pulliam(2) . rolina van gaalen(1) . sang woo park(1) . sebastian funk(1) . federico calboli(1) . sangeeta bhatia(2) . anders ellern bilgrau(1) . rich fitzjohn(4) . zhian n. kamvar(11) . klaus schliep(3) . anne cori(5) . pratik gupte(1) . naima madi(1) . stéphane dray(2) . roman lustrik(1) . adam j kucharski(1) . neil m. ferguson(1) . pierre legendre(1) . pawel piatkowski(1) . vladimir mikryukov(1) . lindsay v. clark(1) . peter solymos(1) . ismail ahmed(1) . bertrand sudre(2) . zhian namir kamvar(1) . patrick barks(1) . jakob schumacher(2) . vp nagraj(2) . technology(1) . caitlin collins(1) . david bauman(1) . tim taylor(9) . stephane ghozzi(1) . simon cauchemez(1) . kristjan eldjarn(1) . charlie whittaker(1) . simon frost(1) . chris hartgerink(1) . edwin van leeuwen(1) . isobel blake(1) . jacob almagro-garcia(1) . hugo gruson(2) . alastair potts(1) . dirk schumacher(3) . salla e. toikkanen(1) . christophe fraser(1) . andree valle-campos(1) . jerome goudet(1) . thomas crellen(1) . aurélie siberchicot(2) . tiago maié(1) . joshua w. lambert(1) . rj ewing(1) . imperial college of science(1) . guillaume larocque(1) . pavel dimens(1) . emmanuel paradis(1) . brian knaus(1) . finlay campbell(3) . caroline colijn(1) . steph locke(1) . olivier hardy(1) . justin lessler(1) . janetta skarp(1) . guillaume blanchet(1) . adam kucharski(1) . elisabeth dahlqwist(1) . rebecca decamp(1) . hélène h wagner(1) . guillaume guenard(1) . frédéric michaud(1) . rosalind eggo(1) . nistara randhawa(1) . eric brown(1) . paula moraga(1) . flavio finger(1) . brian j. knaus(1) . daniel borcard(1) . jake stockwin(1) . gerry tonkin-hill(1) . jun cai(1) . 

RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN). Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.

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