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coda: Output Analysis and Diagnostics for MCMC

Martyn Plummer  Nicky Best  Kate Cowles  Karen Vines  Deepayan Sarkar  Douglas Bates  Russell Almond  Arni Magnusson   View description and downloadsView dependenciesGitHub project

1999 Published
0 Citations
8 Authors
55 Revisions
0.19-4.1 Version
GPL-2 License
Referenced by ⇅ Year
apTreeshape: Analyses of Phylogenetic Treeshape (Version 1.5-0.1)

2005
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bayesbr: Beta Regression on a Bayesian Model (Version 0.0.1.0)

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BayesSAE: Bayesian Analysis of Small Area Estimation (Version 1.0-2)

2013
BayesSPsurv: Bayesian Spatial Split Population Survival Model (Version 0.1.4)

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bcp: Bayesian Analysis of Change Point Problems (Version 4.0.3)

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bdpopt: Optimisation of Bayesian Decision Problems (Version 1.0-1)

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BEST: Bayesian Estimation Supersedes the t-Test (Version 0.5.4)

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BiProbitPartial: Bivariate Probit with Partial Observability (Version 1.0.3)

2019
cvam: Coarsened Variable Modeling (Version 0.9.3)

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dalmatian: Automating the Fitting of Double Linear Mixed Models in "JAGS" and "nimble" (Version 1.0.0)

2018
DAMisc: Dave Armstrong"s Miscellaneous Functions (Version 1.7.2)

2010
hierarchicalDS: Functions to Perform Hierarchical Analysis of Distance Sampling Data (Version 3.0)

2012
MasterBayes: ML and MCMC Methods for Pedigree Reconstruction and Analysis (Version 2.58)

2006
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polyfreqs: Bayesian Population Genomics in Autopolyploids (Version 1.0.2)

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psychtm: Text Mining Methods for Psychological Research (Version 2021.1.0)

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Rlda: Bayesian LDA for Mixed-Membership Clustering Analysis (Version 0.2.6)

2017
saeHB.gpois: SAE using HB Method under Generalized Poisson Distribution (Version 0.1.1)

2022
saeHB.hnb: Small Area Estimation under Hurdle Negative Binomial Distribution using Hierarchical Bayesian Method (Version 0.1.2)

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saeHB.zinb: Small Area Estimation using Hierarchical Bayesian under Zero Inflated Negative Binomial Distribution (Version 0.1.1)

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spflow: Spatial Econometric Interaction Models (Version 0.1.0)

2021
mcmcabn: Flexible Implementation of a Structural MCMC Sampler for DAGs (Version 0.6)

2019
tRophicPosition: Bayesian Trophic Position Estimation with Stable Isotopes (Version 0.8.0)

2017
eiCompare: Compares Different Ecological Inference Methods (Version 3.0.4)

2016
CARlasso: Conditional Autoregressive LASSO (Version 0.1.2)

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bite: Bayesian Integrative Models of Trait Evolution (Version 0.3)

2020
BayesMassBal: Bayesian Data Reconciliation of Separation Processes (Version 1.1.0)

2020
bhpm: Bayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering (Version 1.8.1)

2020
AHMbook: Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2 (Version 0.2.10)

2017
ASMbook: Functions for the Book "Applied Statistical Modeling for Ecologists" (Version 1.0.2)

2024
AnaCoDa: Analysis of Codon Data under Stationarity using a Bayesian Framework (Version 0.1.4.4)

2018
ArchaeoPhases: Post-Processing of Markov Chain Monte Carlo Simulations for Chronological Modelling (Version 2.1.0)

2017
BMAmevt: Multivariate Extremes: Bayesian Estimation of the Spectral Measure (Version 1.0.5)

2013
BNPdensity: Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures (Version 2025.7.29)

2011
BRugs: Interface to the 'OpenBUGS' MCMC Software (Version 0.9-2.1)

2005
BTYDplus: Probabilistic Models for Assessing and Predicting your Customer Base (Version 1.2.0)

2016
BaM: Functions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach" (Version 1.0.3)

2008
BayLum: Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating (Version 0.3.3)

2017
BayesBinMix: Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions (Version 1.4.1)

2016
BayesComm: Bayesian Community Ecology Analysis (Version 0.1-2)

2014
BayesOrdDesign: Bayesian Group Sequential Design for Ordinal Data (Version 0.1.2)

2021
BayesRS: Bayes Factors for Hierarchical Linear Models with Continuous Predictors (Version 0.1.3)

2017
BayesianFactorZoo: Bayesian Solutions for the Factor Zoo: We Just Ran Two Quadrillion Models (Version 0.0.0.3)

2023
BayesianTools: General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics (Version 0.1.8)

2017
CARBayesST: Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data (Version 4.0)

2014
ContRespPP: Predictive Probability for a Continuous Response with an ANOVA Structure (Version 0.4.2)

2022
DPP: Inference of Parameters of Normal Distributions from a Mixture of Normals (Version 0.1.2)

2017
EpiILMCT: Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics (Version 1.1.8)

2017
EpiLPS: A Fast and Flexible Bayesian Tool for Estimating Epidemiological Parameters (Version 1.3.0)

2021
FME: A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis (Version 1.3.6.4)

2009
MCMC.OTU: Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology (Version 1.0.10)

2014
MCMCtreeR: Prepare MCMCtree Analyses and Plot Bayesian Divergence Time Analyses Estimates on Trees (Version 1.1)

2019
MPTmultiverse: Multiverse Analysis of Multinomial Processing Tree Models (Version 0.4-3)

2018
MplusAutomation: An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus (Version 1.2)

2010
NMADiagT: Network Meta-Analysis of Multiple Diagnostic Tests (Version 0.1.2)

2020
NestedCategBayesImpute: Modeling, Imputing and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations (Version 1.2.1)

2016
TESS: Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events (Version 2.1.2)

2012
UPG: Efficient Bayesian Algorithms for Binary and Categorical Data Regression Models (Version 0.3.5)

2021
Ultimixt: Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior (Version 2.1)

2015
XDNUTS: Discontinuous Hamiltonian Monte Carlo with Varying Trajectory Length (Version 1.6.5)

2024
adaptMCMC: Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler (Version 1.5)

2011
aihuman: Experimental Evaluation of Algorithm-Assisted Human Decision-Making (Version 1.0.1)

2023
airGR: Suite of GR Hydrological Models for Precipitation-Runoff Modelling (Version 1.7.8)

2017
amen: Additive and Multiplicative Effects Models for Networks and Relational Data (Version 1.4.5)

2012
aphylo: Statistical Inference and Prediction of Annotations in Phylogenetic Trees (Version 0.3-6)

2022
arm: Data Analysis Using Regression and Multilevel/Hierarchical Models (Version 1.14-4)

2007
baclava: Bayesian Analysis of Cancer Latency with Auxiliary Variable Augmentation (Version 1.1)

2024
bamlss: Bayesian Additive Models for Location, Scale, and Shape (and Beyond) (Version 1.2-5)

2017
bayesDccGarch: Methods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model (Version 3.0.4)

2015
bayesGARCH: Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations (Version 2.1.10)

2008
bayesSurv: Bayesian Survival Regression with Flexible Error and Random Effects Distributions (Version 3.8)

2004
bayesanova: Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models (Version 1.6)

2019
bayescount: Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC (Version 0.9.99-9)

2007
bayeslm: Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors (Version 1.0.1)

2017
bayest: Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models (Version 1.5)

2019
bayesvl: Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' (Version 1.0.0)

2019
bcgam: Bayesian Constrained Generalised Linear Models (Version 1.0)

2018
bssm: Bayesian Inference of Non-Linear and Non-Gaussian State Space Models (Version 2.0.3)

2017
btergm: Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood (Version 1.11.1)

2015
bvartools: Bayesian Inference of Vector Autoregressive and Error Correction Models (Version 0.2.4)

2019
c212: Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) (Version 1.0.1)

2017
ctmcd: Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data (Version 1.4.4)

2016
diagis: Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling (Version 0.2.3)

2016
doublIn: Estimate Incubation or Latency Time using Doubly Interval Censored Observations (Version 0.2.0)

2024
eefAnalytics: Robust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs (Version 1.1.5)

2017
endorse: Bayesian Measurement Models for Analyzing Endorsement Experiments (Version 1.6.2)

2012
ergm: Fit, Simulate and Diagnose Exponential-Family Models for Networks (Version 4.11.0)

2008
fabMix: Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components (Version 5.1)

2018
factorstochvol: Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models (Version 1.1.0)

2016
genMCMCDiag: Generalized Convergence Diagnostics for Difficult MCMC Algorithms (Version 0.2.3)

2024
geoBayes: Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods (Version 0.7.4)

2014
glmmfields: Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling (Version 0.1.8)

2018
greta: Simple and Scalable Statistical Modelling in R (Version 0.5.0)

2017
icensBKL: Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre (Version 1.5)

2017
linelistBayes: Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches (Version 1.0)

2024
list: Statistical Methods for the Item Count Technique and List Experiment (Version 9.2.6)

2010
lvmcomp: Stochastic EM Algorithms for Latent Variable Models with a High-Dimensional Latent Space (Version 1.2)

2018
mcgibbsit: Warnes and Raftery's 'MCGibbsit' MCMC Run Length and Convergence Diagnostic (Version 1.2.2)

2004
mcmcOutput: Functions to Store, Manipulate and Display Markov Chain Monte Carlo (MCMC) Output (Version 0.1.3)

2020
mcmcplots: Create Plots from MCMC Output (Version 0.4.3)

2010
metaBMA: Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis (Version 0.6.9)

2017
miWQS: Multiple Imputation Using Weighted Quantile Sum Regression (Version 0.4.4)

2018
miceadds: Some Additional Multiple Imputation Functions, Especially for 'mice' (Version 3.18-36)

2014
midas2: Bayesian Platform Design with Subgroup Efficacy Exploration(MIDAS-2) (Version 1.1.0)

2021
mixAK: Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering (Version 5.8)

2009
msaeHB: Multivariate Small Area Estimation using Hierarchical Bayesian Method (Version 0.1.0)

2022
mtarm: Bayesian Estimation of Multivariate Threshold Autoregressive Models (Version 0.1.8)

2024
multimark: Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks (Version 2.1.7)

2015
multinomialLogitMix: Clustering Multinomial Count Data under the Presence of Covariates (Version 1.1)

2022
multinomineq: Bayesian Inference for Multinomial Models with Inequality Constraints (Version 0.2.6)

2019
neojags: Neo-Normal Distributions Family for Markov Chain Monte Carlo (MCMC) Models in 'JAGS' (Version 0.1.6)

2023
netcmc: Spatio-Network Generalised Linear Mixed Models for Areal Unit and Network Data (Version 1.0.2)

2022
outbreaker2: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data (Version 1.1.4)

2017
phase1PRMD: Personalized Repeated Measurement Design for Phase I Clinical Trials (Version 1.0.2)

2019
postpack: Utilities for Processing Posterior Samples Stored in 'mcmc.lists' (Version 0.5.4)

2020
ref.ICAR: Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data (Version 2.0.2)

2018
rjmcmc: Reversible-Jump MCMC Using Post-Processing (Version 0.4.5)

2017
robustsae: Robust Bayesian Small Area Estimation (Version 0.1.0)

2016
runMCMCbtadjust: Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters (Version 1.1.2)

2023
runjags: Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS (Version 2.2.2-5)

2008
saeHB.ME: Small Area Estimation with Measurement Error using Hierarchical Bayesian Method (Version 1.0.1)

2022
saeHB.ZIB: Small Area Estimation using Hierarchical Bayesian under Zero Inflated Binomial Distribution (Version 0.1.1)

2022
saeHB.panel.beta: Small Area Estimation using HB for Rao Yu Model under Beta Distribution (Version 0.1.5)

2023
saeHB.panel: Small Area Estimation using Hierarchical Bayesian Method for Rao Yu Model (Version 0.1.1)

2022
seeds: Estimate Hidden Inputs using the Dynamic Elastic Net (Version 0.9.1)

2020
shinystan: Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models (Version 2.7.0)

2015
shrinkDSM: Efficient Bayesian Inference for Dynamic Survival Models with Shrinkage (Version 1.0.0)

2021
shrinkTVP: Efficient Bayesian Inference for Time-Varying Parameter Models with Shrinkage (Version 3.1.1)

2019
shrinkTVPVAR: Efficient Bayesian Inference for TVP-VAR-SV Models with Shrinkage (Version 1.0.1)

2024
slfm: Fitting a Bayesian Sparse Latent Factor Model in Gene Expression Analysis (Version 1.0.2)

2014
spAbundance: Univariate and Multivariate Spatial Modeling of Species Abundance (Version 0.2.1)

2023
spBayesSurv: Bayesian Modeling and Analysis of Spatially Correlated Survival Data (Version 1.1.9)

2014
spNNGP: Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes (Version 1.0.1)

2017
spOccupancy: Single-Species, Multi-Species, and Integrated Spatial Occupancy Models (Version 0.8.0)

2021
sparsereg: Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data (Version 1.2)

2015
sphet: Estimation of Spatial Autoregressive Models with and without Heteroskedastic Innovations (Version 2.1-1)

2010
spikeSlabGAM: Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models (Version 1.1-20)

2011
sspse: Estimating Hidden Population Size using Respondent Driven Sampling Data (Version 1.1.0-6)

2015
statnet.common: Common R Scripts and Utilities Used by the Statnet Project Software (Version 4.13.0)

2013
stochvol: Efficient Bayesian Inference for Stochastic Volatility (SV) Models (Version 3.2.8)

2013
superdiag: A Comprehensive Test Suite for Testing Markov Chain Nonconvergence (Version 2.0)

2012
surveillance: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena (Version 1.25.0)

2005
telefit: Estimation and Prediction for Remote Effects Spatial Process Models (Version 1.0.3)

2018
tergm: Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models (Version 4.2.2)

2013
vICC: Varying Intraclass Correlation Coefficients (Version 1.0.0)

2020
walker: Bayesian Generalized Linear Models with Time-Varying Coefficients (Version 1.0.10)

2017
zoib: Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression (Version 1.6.1)

2014
zoo: S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations) (Version 1.8-15)

2004
BANOVA: Hierarchical Bayesian ANOVA Models (Version 1.2.1)

2014
fitode: Tools for Ordinary Differential Equations Model Fitting (Version 0.1.1)

2022
bayeslm Priors: (Version )

0
RPANDA: Phylogenetic ANalyses of DiversificAtion (Version 2.5)

2014
nse: Numerical Standard Errors Computation in R (Version 1.22)

2017
wiqid: Quick and Dirty Estimates for Wildlife Populations (Version 0.3.3)

2016
isotracer: Isotopic Tracer Analysis Using MCMC (Version 1.1.8)

2021
CircSpaceTime: Spatial and Spatio-Temporal Bayesian Model for Circular Data (Version 0.9.0)

2019
HelpersMG Functions: (Version )

0
TransPhylo: Inference of Transmission Tree from a Dated Phylogeny (Version 1.4.5)

2020
motmot: Models of Trait Macroevolution on Trees (Version 2.1.3)

2012
spBFA: Spatial Bayesian Factor Analysis (Version 1.5.0)

2019
BNPmix: Bayesian Nonparametric Mixture Models (Version 1.1.0)

2019
gfiExtremes: Generalized Fiducial Inference for Extremes (Version 1.0.1)

2020
ContRespPP Structure: (Version )

0
DBR: Discrete Beta Regression (Version 1.4.1)

2022
DGP4LCF: Dependent Gaussian Processes for Longitudinal Correlated Factors (Version 1.0.0.1)

2024
EpiEstim: Estimate Time Varying Reproduction Numbers from Epidemic Curves (Version 2.2-5)

2012
EpiILM: Spatial and Network Based Individual Level Models for Epidemics (Version 1.5.3)

2017
EpiLPS Parameters: (Version )

0
EpiModel: Mathematical Modeling of Infectious Disease Dynamics (Version 2.5.0)

2013
NobBS: Nowcasting by Bayesian Smoothing (Version 1.1.0)

2020
bfw: Bayesian Framework for Computational Modeling (Version 0.4.2)

2018
bgms: Bayesian Analysis of Networks of Binary and/or Ordinal Variables (Version 0.1.6.2)

2023
bgsmtr: Bayesian Group Sparse Multi-Task Regression (Version 0.7)

2016
bgumbel: Bimodal Gumbel Distribution (Version 0.0.3)

2021
bhm: Biomarker Threshold Models (Version 1.19)

2016
factor.switching: Post-Processing MCMC Outputs of Bayesian Factor Analytic Models (Version 1.4)

2020
ASMbook Ecologists": (Version )

0
AdMit: Adaptive Mixture of Student-t Distributions (Version 2.1.9)

2008
AnaCoDa Framework: (Version )

0
AuxSurvey: Survey Analysis with Auxiliary Discretized Variables (Version 1.1)

2024
BAMBI: Bivariate Angular Mixture Models (Version 2.3.6)

2017
BAYSTAR: On Bayesian Analysis of Threshold Autoregressive Models (Version 0.2-10)

2008
BCClong: Bayesian Consensus Clustering for Multiple Longitudinal Features (Version 1.0.3)

2023
BCHM: Clinical Trial Calculation Based on BCHM Design (Version 1.00)

2019
BDWreg: Bayesian Inference for Discrete Weibull Regression (Version 1.3.0)

2016
BEND: Bayesian Estimation of Nonlinear Data (BEND) (Version 1.1)

2024
BFpack: Flexible Bayes Factor Testing of Scientific Expectations (Version 1.5.3)

2019
BGGE: Bayesian Genomic Linear Models Applied to GE Genome Selection (Version 0.6.5)

2017
BGVAR: Bayesian Global Vector Autoregressions (Version 2.5.9)

2020
BMAmevt Measure: (Version )

0
BNPdensity Measures: (Version )

0
BNSP: Bayesian Non- And Semi-Parametric Model Fitting (Version 2.2.3)

2014
BSL: Bayesian Synthetic Likelihood (Version 3.2.5)

2018
BSPADATA: Bayesian Proposal to Fit Spatial Econometric Models (Version 1.1.0)

2018
BSTZINB: Association Among Disease Counts and Socio-Environmental Factors (Version 2.0.1)

2024
BSTFA: Bayesian Spatio-Temporal Factor Analysis Model (Version 0.1.0)

2025
BTIME: Bayesian Hierarchical Models for Single-Cell Protein Data (Version 1.0.0)

2025
BTSPAS: Bayesian Time-Stratified Population Analysis (Version 2024.11.1)

2010
BVAR: Hierarchical Bayesian Vector Autoregression (Version 1.0.5)

2019
BayesARIMAX: Bayesian Estimation of ARIMAX Model (Version 0.1.1)

2020
BayesBEKK: Bayesian Estimation of Bivariate Volatility Model (Version 0.1.1)

2019
BayesBinMix Distributions: (Version )

0
BayesCACE: Bayesian Model for CACE Analysis (Version 1.2.3)

2021
BayesChange: Bayesian Methods for Change Point Analysis (Version 2.2.0)

2025
BayesDissolution: Bayesian Models for Dissolution Testing (Version 0.2.1)

2022
BayesFM: Bayesian Inference for Factor Modeling (Version 0.1.7)

2016
BayesFactor: Computation of Bayes Factors for Common Designs (Version 0.9.12-4.7)

2012
BayesGWQS: Bayesian Grouped Weighted Quantile Sum Regression (Version 0.1.1)

2020
BayesLCA: Bayesian Latent Class Analysis (Version 1.9)

2012
BayesLN: Bayesian Inference for Log-Normal Data (Version 0.2.12)

2020
BayesMFSurv: Bayesian Misclassified-Failure Survival Model (Version 0.1.0)

2019
BayesMoFo: Bayesian Mortality Forecasting (Version 0.1.0)

2025
BayesPIM: Bayesian Prevalence-Incidence Mixture Model (Version 1.0.0)

2025
BayesPostEst: Generate Postestimation Quantities for Bayesian MCMC Estimation (Version 0.4.0)

2019
BayesRS Predictors: (Version )

0
BayesSIM 'nimble': (Version )

0
BayesTools: Tools for Bayesian Analyses (Version 0.2.23)

2021
BayesTwin: Bayesian Analysis of Item-Level Twin Data (Version 1.0)

2017
BayesX: R Utilities Accompanying the Software Package BayesX (Version 0.3-3)

2009
BayesianTools Statistics: (Version )

0
Bayesrel: Bayesian Reliability Estimation (Version 0.7.8)

2019
Bchron: Age-Depth Radiocarbon Modelling (Version 4.7.8)

2008
Bergm: Bayesian Exponential Random Graph Models (Version 5.0.7)

2009
BiDAG: Bayesian Inference for Directed Acyclic Graphs (Version 2.1.4)

2017
BiostatsUHNplus: Nested Data Summary, Adverse Events and REDCap (Version 1.0.3)

2023
CARBayes: Spatial Generalised Linear Mixed Models for Areal Unit Data (Version 6.1.1)

2012
CARBayesST Data: (Version )

0
COMIX: Coarsened Mixtures of Hierarchical Skew Kernels (Version 1.0.1)

2022
DPTM: Dynamic Panel Multiple Threshold Model with Fixed Effects (Version 3.0.2)

2024
DrBats: Data Representation: Bayesian Approach That's Sparse (Version 0.1.6)

2016
EMC2: Bayesian Hierarchical Analysis of Cognitive Models of Choice (Version 3.4.1)

2024
EcoDiet: Estimating a Diet Matrix from Biotracer and Stomach Content Data (Version 2.0.1)

2020
EvidenceSynthesis: Synthesizing Causal Evidence in a Distributed Research Network (Version 1.1.0)

2020
FAVAR: Bayesian Analysis of a FAVAR Model (Version 0.1.3)

2022
HDInterval: Highest (Posterior) Density Intervals (Version 0.2.4)

2016
HLSM: Hierarchical Latent Space Network Model (Version 0.9.2)

2014
HelpersMG: Tools for Various R Functions Helpers (Version 2025.12.22)

2015
Hmsc: Hierarchical Model of Species Communities (Version 3.3-7)

2019
IFP: Identifying Functional Polymorphisms (Version 0.2.4)

2012
IRTM: Theory-Driven Item Response Theory (IRT) Models (Version 0.0.1.1)

2025
ISEtools: Ion Selective Electrodes Analysis Methods (Version 3.2.1)

2019
InSilicoVA: Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm (Version 1.4.2)

2015
JMbayes2: Extended Joint Models for Longitudinal and Time-to-Event Data (Version 0.5-7)

2021
JointAI: Joint Analysis and Imputation of Incomplete Data (Version 1.0.6)

2018
LAM: Some Latent Variable Models (Version 0.7-22)

2017
LAWBL: Latent (Variable) Analysis with Bayesian Learning (Version 1.5.0)

2020
LDATS: Latent Dirichlet Allocation Coupled with Time Series Analyses (Version 0.3.0)

2019
LNIRT: LogNormal Response Time Item Response Theory Models (Version 0.5.1)

2016
Luminescence: Comprehensive Luminescence Dating Data Analysis (Version 1.1.2)

2012
MBNMAdose: Dose-Response MBNMA Models (Version 0.5.0)

2019
MCMC.qpcr: Bayesian Analysis of qRT-PCR Data (Version 1.2.4)

2013
MCMCglmm: MCMC Generalised Linear Mixed Models (Version 2.36)

2009
MCMCpack: Markov Chain Monte Carlo (MCMC) Package (Version 1.7-1)

2003
MCMCvis: Tools to Visualize, Manipulate, and Summarize MCMC Output (Version 0.16.5)

2016
MJMbamlss: Multivariate Joint Models with 'bamlss' (Version 0.1.0)

2023
MSGARCH: Markov-Switching GARCH Models (Version 2.51)

2016
MetaLandSim: Landscape and Range Expansion Simulation (Version 2.0.0)

2014
MetaStan: Bayesian Meta-Analysis via 'Stan' (Version 1.0.0)

2018
MethComp: Analysis of Agreement in Method Comparison Studies (Version 1.30.2)

2011
MfUSampler: Multivariate-from-Univariate (MfU) MCMC Sampler (Version 1.1.0)

2014
MigConnectivity: Estimate Migratory Connectivity for Migratory Animals (Version 0.5.0)

2024
MixSIAR: Bayesian Mixing Models in R (Version 3.1.12)

2016
MultiNMix: Multi-Species N-Mixture (MNM) Models with 'nimble' (Version 0.1.0)

2025
NMADTA: Network Meta-Analysis of Multiple Diagnostic Tests (Version 0.1.2)

2025
NPBayesImputeCat: Non-Parametric Bayesian Multiple Imputation for Categorical Data (Version 0.6)

2018
PICBayes: Bayesian Models for Partly Interval-Censored Data (Version 1.0)

2021
PINstimation: Estimation of the Probability of Informed Trading (Version 0.2.0)

2022
PLMIX: Bayesian Analysis of Finite Mixture of Plackett-Luce Models (Version 2.2.0)

2016
POUMM: The Phylogenetic Ornstein-Uhlenbeck Mixed Model (Version 2.1.8)

2017
PVAClone: Population Viability Analysis with Data Cloning (Version 0.1-8)

2012
PhaseType: Inference for Phase-Type Distributions (Version 0.3.0)

2011
QAEnsemble: Ensemble Quadratic and Affine Invariant Markov Chain Monte Carlo (Version 1.0.0)

2025
R2BayesX: Estimate Structured Additive Regression Models with 'BayesX' (Version 1.1-6)

2012
R2MLwiN: Running 'MLwiN' from Within R (Version 0.8-10)

2012
R2OpenBUGS: Running OpenBUGS from R (Version 3.2-4)

2011
R2WinBUGS: Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS' (Version 2.1-23)

2004
R2admb: 'ADMB' to R Interface Functions (Version 0.7.16.3)

2011
R2jags: Using R to Run 'JAGS' (Version 0.8-9)

2008
RGE: Response from Genotype to Environment (Version 1.0)

2021
RMark: R Code for Mark Analysis (Version 3.0.6)

2011
RcmdrPlugin.RMTCJags: R MTC Jags 'Rcmdr' Plugin (Version 1.0-2)

2014
RoBMA: Robust Bayesian Meta-Analyses (Version 3.6.1)

2020
RoBSA: Robust Bayesian Survival Analysis (Version 1.0.3)

2022
Romeb: Robust Median-Based Bayesian Growth Curve Modeling (Version 0.1.2)

2025
Rtwalk: An MCMC Sampler Using the t-Walk Algorithm (Version 2.0.0)

2015
SALTSampler: Efficient Sampling on the Simplex (Version 1.1.0)

2015
SAME: Seamless Adaptive Multi-Arm Multi-Stage Enrichment (Version 0.1.0)

2023
SIBER: Stable Isotope Bayesian Ellipses in R (Version 2.1.9)

2015
SeqFeatR: A Tool to Associate FASTA Sequences and Features (Version 0.3.1)

2014
SimBIID: Simulation-Based Inference Methods for Infectious Disease Models (Version 0.2.2)

2019
TAM: Test Analysis Modules (Version 4.3-25)

2013
TreeBUGS: Hierarchical Multinomial Processing Tree Modeling (Version 1.5.3)

2016
XDNUTS Length: (Version )

0
Xcertainty: Estimating Lengths and Uncertainty from Photogrammetric Imagery (Version 1.0.1)

2024
ZIHINAR1: Zero-Inflated and Hurdle INAR(1) Models (Version 0.1.0)

2025
adaptMCMC Sampler: (Version )

0
adaptsmoFMRI: Adaptive Smoothing of FMRI Data (Version 1.2)

2012
adsoRptionMCMC: Bayesian Estimation of Adsorption Isotherms via MCMC (Version 0.1.0)

2025
afdx: Diagnosis Performance Using Attributable Fraction (Version 1.1.1)

2021
agRee: Various Methods for Measuring Agreement (Version 0.5-3)

2012
aggreCAT: Mathematically Aggregating Expert Judgments (Version 1.0.0)

2025
aihuman Decision-Making: (Version )

0
airGR Modelling: (Version )

0
altmeta: Alternative Meta-Analysis Methods (Version 4.3)

2016
ammiBayes: Bayesian Ammi Model for Continuous Data (Version 1.0-3)

2022
anominate: Alpha-NOMINATE Ideal Point Estimator (Version 0.7)

2014
apollo: Tools for Choice Model Estimation and Application (Version 0.3.6)

2019
arm Models: (Version )

0
auRoc: Various Methods to Estimate the AUC (Version 0.2-1)

2015
babelmixr2 Software: (Version )

0
baclava Augmentation: (Version )

0
baker: "Nested Partially Latent Class Models" (Version 1.0.4)

2022
bamlss Beyond): (Version )

0
bamp: Bayesian Age-Period-Cohort Modeling and Prediction (Version 2.1.3)

2018
baorista: Bayesian Aoristic Analyses (Version 0.2.1)

2024
bartcs: Bayesian Additive Regression Trees for Confounder Selection (Version 1.3.0)

2022
bayesCureRateModel: Bayesian Cure Rate Modeling for Time-to-Event Data (Version 1.6)

2024
bayesGARCH Innovations: (Version )

0
bayesImageS: Bayesian Methods for Image Segmentation using a Potts Model (Version 0.7-0)

2016
bayesLife: Bayesian Projection of Life Expectancy (Version 5.3-1)

2011
bayesMRM: Bayesian Multivariate Receptor Modeling (Version 2.4.0)

2022
bayesMig: Bayesian Projection of Migration (Version 1.0-0)

2023
bayesPO: Bayesian Inference for Presence-Only Data (Version 0.5.0)

2021
bayesTFR: Bayesian Fertility Projection (Version 7.4-4)

2010
bayesianVARs: MCMC Estimation of Bayesian Vectorautoregressions (Version 0.1.5)

2024
bayesmix: Bayesian Mixture Models with JAGS (Version 0.7-6)

2004
bcf: Causal Inference using Bayesian Causal Forests (Version 2.0.2)

2018
bipd: Bayesian Individual Patient Data Meta-Analysis using 'JAGS' (Version 0.3)

2022
bkmrhat: Parallel Chain Tools for Bayesian Kernel Machine Regression (Version 1.1.7)

2020
blapsr: Bayesian Inference with Laplace Approximations and P-Splines (Version 0.7.0)

2020
blatent: Bayesian Latent Variable Models (Version 0.1.2)

2020
blavaan: Bayesian Latent Variable Analysis (Version 0.5-10)

2015
bmstdr: Bayesian Modeling of Spatio-Temporal Data with R (Version 0.8.2)

2022
bnma: Bayesian Network Meta-Analysis using 'JAGS' (Version 1.6.1)

2019
boral: Bayesian Ordination and Regression AnaLysis (Version 2.0.3)

2014
bplsr: Bayesian partial least squares regression (Version 1.0.4)

2024
bpr: Fitting Bayesian Poisson Regression (Version 1.0.8)

2021
brea: Bayesian Recurrent Events Analysis (Version 0.4.2)

2016
bridgesampling: Bridge Sampling for Marginal Likelihoods and Bayes Factors (Version 1.2-1)

2017
brms: Bayesian Regression Models using 'Stan' (Version 2.23.0)

2015
brokenstick: Broken Stick Model for Irregular Longitudinal Data (Version 2.6.0)

2020
broom.mixed: Tidying Methods for Mixed Models (Version 0.2.9.6)

2018
broom: Convert Statistical Objects into Tidy Tibbles (Version 1.0.11)

2014
bsam: Bayesian State-Space Models for Animal Movement (Version 1.1.3)

2016
bspcov: Bayesian Sparse Estimation of a Covariance Matrix (Version 1.0.3)

2024
bsreg: Bayesian Spatial Regression Models (Version 0.0.2)

2021
bssm Models: (Version )

0
btergm Pseudolikelihood: (Version )

0
bvartools Models: (Version )

0
camtrapR: Camera Trap Data Management and Analysis Framework (Version 3.0.0)

2015
catalytic: Tools for Applying Catalytic Priors in Statistical Modeling (Version 0.1.0)

2024
coalescentMCMC: MCMC Algorithms for the Coalescent (Version 0.4-4)

2012
cobin Data: (Version )

0
cogirt: Cognitive Testing Using Item Response Theory (Version 1.0.0)

2025
compareMCMCs: Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines (Version 0.6.0)

2022
countSTAR: Flexible Modeling of Count Data (Version 1.0.2)

2023
cplm: Compound Poisson Linear Models (Version 0.7-12.1)

2011
crossnma: Cross-Design & Cross-Format Network Meta-Analysis and Regression (Version 1.3.0)

2022
cubfits: Codon Usage Bias Fits (Version 0.1-4)

2014
dRiftDM: Estimating (Time-Dependent) Drift Diffusion Models (Version 0.3.1)

2025
dclone: Data Cloning and MCMC Tools for Maximum Likelihood Methods (Version 2.3-3)

2009
dcmle: Hierarchical Models Made Easy with Data Cloning (Version 0.4-2)

2011
deBInfer: Bayesian Inference for Differential Equations (Version 0.4.4)

2016
deepSTRAPP: Test for Differences in Diversification Rates over Time (Version 1.0.0)

2026
dlmtree: Bayesian Treed Distributed Lag Models (Version 1.1.0)

2024
dmbc: Model Based Clustering of Binary Dissimilarity Measurements (Version 1.0.3)

2020
dreamer: Dose Response Models for Bayesian Model Averaging (Version 3.2.0)

2021
dsp: Dynamic Shrinkage Process and Change Point Detection (Version 1.2.0)

2025
eSIR: Extended State-Space SIR Models (Version 0.4.2)

2021
easybgm: Extracting and Visualizing Bayesian Graphical Models (Version 0.3.1)

2023
eggCounts: Hierarchical Modelling of Faecal Egg Counts (Version 2.5-1)

2013
eiPack: Ecological Inference and Higher-Dimension Data Management (Version 0.2-2)

2006
elrm: Exact Logistic Regression via MCMC (Version 1.2.6)

2006
embryogrowth: Tools to Analyze the Thermal Reaction Norm of Embryo Growth (Version 2025.12.22)

2014
emdbook: Support Functions and Data for "Ecological Models and Data" (Version 1.3.14)

2007
emmeans: Estimated Marginal Means, aka Least-Squares Means (Version 2.0.1)

2017
endorse Experiments: (Version )

0
epts: Educational Platform Trials Simulator (Version 1.2.2)

2025
ergm Networks: (Version )

0
ergmito: Exponential Random Graph Models for Small Networks (Version 0.3-2)

2020
ern: Effective Reproduction Number Estimation (Version 2.1.2)

2024
evolqg: Evolutionary Quantitative Genetics (Version 0.3-6)

2015
evolvability: Calculation of Evolvability Parameters (Version 2.0.1)

2014
ewoc: Escalation with Overdose Control (Version 0.3.0)

2017
exdqlm: Extended Dynamic Quantile Linear Models (Version 0.2.0)

2021
fdasrvf: Elastic Functional Data Analysis (Version 2.4.2)

2012
fkbma: Free Knot-Bayesian Model Averaging (Version 0.2.0)

2025
fmcmc: A friendly MCMC framework (Version 0.5-2)

2019
gap: Genetic Analysis Package (Version 1.6)

2004
gconsensus: Consensus Value Constructor (Version 0.3.2)

2020
geiger: Analysis of Evolutionary Diversification (Version 2.0.11)

2007
gemtc: Network Meta-Analysis Using Bayesian Methods (Version 1.1-0)

2012
genMCMCDiag Algorithms: (Version )

0
geoBayes Methods: (Version )

0
ggdmc: Cognitive Models (Version 0.2.6.2)

2016
ggmcmc: Tools for Analyzing MCMC Simulations from Bayesian Inference (Version 1.5.1.2)

2012
glmmTMB: Generalized Linear Mixed Models using Template Model Builder (Version 1.1.14)

2017
hSDM: Hierarchical Bayesian Species Distribution Models (Version 1.4.4)

2012
handwriter: Handwriting Analysis in R (Version 3.2.4)

2021
hbsaems: Hierarchical Bayes Small Area Estimation Model using 'Stan' (Version 0.1.1)

2025
hdpGLM: Hierarchical Dirichlet Process Generalized Linear Models (Version 1.0.5)

2020
icenReg: Regression Models for Interval Censored Data (Version 2.0.16)

2015
iglm: Regression under Network Interference (Version 1.1)

2025
immer: Item Response Models for Multiple Ratings (Version 1.5-13)

2015
invitroTKstats: In Vitro Toxicokinetic Data Processing and Analysis Pipeline (Version 0.0.13)

2025
ivd: Individual Variance Detection (Version 1.0.0)

2025
ivdoctr: Ensures Mutually Consistent Beliefs When Using IVs (Version 1.0.1)

2020
jSDM: Joint Species Distribution Models (Version 0.2.7)

2019
jagsUI: A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses (Version 1.6.3)

2015
jagstargets: Targets for JAGS Pipelines (Version 1.2.2)

2021
krige: Geospatial Kriging with Metropolis Sampling (Version 0.6.2)

2018
latentnet: Latent Position and Cluster Models for Statistical Networks (Version 2.12.0)

2005
lcra: Bayesian Joint Latent Class and Regression Models (Version 1.1.5)

2020
lira: LInear Regression in Astronomy (Version 2.0.1)

2015
list Experiment: (Version )

0
llbayesireg: The L-Logistic Bayesian Regression (Version 1.0.0)

2019
lmls: Gaussian Location-Scale Regression (Version 0.1.1)

2022
lsirm12pl: Latent Space Item Response Model (Version 1.3.9)

2022
marked: Mark-Recapture Analysis for Survival and Abundance Estimation (Version 1.2.8)

2013
mcgibbsit Diagnostic: (Version )

0
mcmcderive: Derive MCMC Parameters (Version 0.1.2)

2019
mcmcensemble: Ensemble Sampler for Affine-Invariant MCMC (Version 3.2.0)

2020
mcmcr: Manipulate MCMC Samples (Version 0.6.2)

2018
mcmcsae: Markov Chain Monte Carlo Small Area Estimation (Version 0.8.0)

2020
mcp: Regression with Multiple Change Points (Version 0.3.4)

2020
mdmb: Model Based Treatment of Missing Data (Version 1.9-22)

2017
metaBMA Meta-Analysis: (Version )

0
metamisc: Meta-Analysis of Diagnosis and Prognosis Research Studies (Version 0.4.0)

2012
metropolis: The Metropolis Algorithm (Version 0.1.8)

2020
miceadds 'mice': (Version )

0
midas2 Exploration(MIDAS-2): (Version )

0
missingHE: Missing Outcome Data in Health Economic Evaluation (Version 1.5.1)

2019
modelbased: Estimation of Model-Based Predictions, Contrasts and Means (Version 0.13.1)

2020
morse: Modelling Reproduction and Survival Data in Ecotoxicology (Version 3.3.5)

2014
morseDR Toxicology: (Version )

0
msaeHB Method: (Version )

0
mtarm Models: (Version )

0
multibridge: Evaluating Multinomial Order Restrictions with Bridge Sampling (Version 1.3.0)

2021
multimark Marks: (Version )

0
multinomialLogitMix Covariates: (Version )

0
multinomineq Constraints: (Version )

0
multiocc: Fits Multivariate Spatio-Temporal Occupancy Model (Version 0.2.3)

2022
mvgam: Multivariate (Dynamic) Generalized Additive Models (Version 1.1.594)

2024
nLTT: Calculate the NLTT Statistic (Version 1.4.10)

2015
nimble: MCMC, Particle Filtering, and Programmable Hierarchical Modeling (Version 1.4.0)

2016
nimbleAPT: Adaptive Parallel Tempering for 'NIMBLE' (Version 1.0.7)

2021
nimbleCarbon: Bayesian Analyses of Radiocarbon Dates with NIMBLE (Version 0.2.6)

2021
nimbleNoBounds: Transformed Distributions for Improved MCMC Efficiency (Version 1.0.3)

2022
nimbleSCR: Spatial Capture-Recapture (SCR) Methods Using 'nimble' (Version 0.2.1)

2020
nimblewomble: Bayesian Wombling using 'nimble' (Version 0.1.0)

2025
nlist: Lists of Numeric Atomic Objects (Version 0.4.0)

2020
nmathresh: Thresholds and Invariant Intervals for Network Meta-Analysis (Version 0.1.6)

2018
noisyCE2: Cross-Entropy Optimisation of Noisy Functions (Version 1.1.0)

2019
optimalThreshold: Bayesian Methods for Optimal Threshold Estimation (Version 1.0)

2020
ordinalbayes: Bayesian Ordinal Regression for High-Dimensional Data (Version 0.1.2)

2022
parameters: Processing of Model Parameters (Version 0.28.3)

2019
pcnetmeta: Patient-Centered Network Meta-Analysis (Version 2.8)

2014
pexm: Loading a JAGS Module for the Piecewise Exponential Distribution (Version 1.1.3)

2020
phase1PRMD Trials: (Version )

0
phase1RMD: Repeated Measurement Design for Phase I Clinical Trial (Version 1.0.9)

2017
phytools: Phylogenetic Tools for Comparative Biology (and Other Things) (Version 2.5-2)

2011
plotMCMC: MCMC Diagnostic Plots (Version 2.0.1)

2014
pmwg: Particle Metropolis Within Gibbs (Version 0.2.7)

2020
polySegratioMM: Bayesian Mixture Models for Marker Dosage in Autopolyploids (Version 0.6-4)

2009
pomp: Statistical Inference for Partially Observed Markov Processes (Version 6.4)

2007
pompp: Presence-Only for Marked Point Process (Version 0.1.3)

2022
popReconstruct: Reconstruct Human Populations of the Recent Past (Version 1.0-6)

2012
postpack 'mcmc.lists': (Version )

0
prevalence: Tools for Prevalence Assessment Studies (Version 0.4.1)

2013
pscl: Political Science Computational Laboratory (Version 1.5.9)

2005
ptycho: Bayesian Variable Selection with Hierarchical Priors (Version 1.1-5)

2015
purgeR: Inbreeding-Purging Estimation in Pedigreed Populations (Version 1.8.2)

2021
qgg: Statistical Tools for Quantitative Genetic Analyses (Version 1.1.6)

2019
qrjoint: Joint Estimation in Linear Quantile Regression (Version 2.0-11)

2015
r4ss: R Code for Stock Synthesis (Version 1.44.0)

2009
rFIA: Estimation of Forest Variables using the FIA Database (Version 1.1.2)

2019
ramps: Bayesian Geostatistical Modeling with RAMPS (Version 0.6.18)

2007
ratematrix: Bayesian Estimation of the Evolutionary Rate Matrix (Version 1.2.5)

2018
rater: Statistical Models of Repeated Categorical Rating Data (Version 1.3.2)

2020
rbacon: Age-Depth Modelling using Bayesian Statistics (Version 3.5.2)

2017
rbi: Interface to 'LibBi' (Version 1.0.0)

2016
redist: Simulation Methods for Legislative Redistricting (Version 4.3.1)

2015
relevent: Relational Event Models (Version 1.2-1)

2010
remiod: Reference-Based Multiple Imputation for Ordinal/Binary Response (Version 1.0.2)

2022
rjags: Bayesian Graphical Models using MCMC (Version 4-17)

2008
rjuliabugs: Interface to 'JuliaBUGS.jl' from R (Version 0.1.0)

2025
rnmamod: Bayesian Network Meta-Analysis with Missing Participants (Version 0.5.0)

2021
rpm: Modeling of Revealed Preferences Matchings (Version 0.7-4)

2023
rr: Statistical Methods for the Randomized Response Technique (Version 1.4.2)

2015
rstan: R Interface to Stan (Version 2.32.7)

2015
rtmpt: Fitting (Exponential/Diffusion) RT-MPT Models (Version 2.0-3)

2019
rwty: R We There Yet? Visualizing MCMC Convergence in Phylogenetics (Version 1.0.3)

2016
saeHB.ME.beta: SAE with Measurement Error using HB under Beta Distribution (Version 1.1.0)

2023
saeHB.panel.beta Distribution: (Version )

0
saeHB.spatial: Small Area Estimation Hierarchical Bayes For Spatial Model (Version 0.1.1)

2022
saeHB.twofold: Hierarchical Bayes Twofold Subarea Level Model SAE (Version 0.1.2)

2022
saeHB: Small Area Estimation using Hierarchical Bayesian Method (Version 0.2.3)

2021
saeHB.unit: Basic Unit Level Model using Hierarchical Bayesian Approach (Version 0.1.0)

2023
sbde: Semiparametric Bayesian Density Estimation (Version 1.0-2)

2022
scape: Statistical Catch-at-Age Plotting Environment (Version 2.3.5)

2005
season: Seasonal Analysis of Health Data (Version 0.3.16)

2009
shrinkDSM Shrinkage: (Version )

0
shrinkTVPVAR Shrinkage: (Version )

0
simlandr: Simulation-Based Landscape Construction for Dynamical Systems (Version 0.4.0)

2021
simpleMH: Simple Metropolis-Hastings MCMC Algorithm (Version 0.1.1)

2021
sirt: Supplementary Item Response Theory Models (Version 4.2-133)

2013
slfm Analysis: (Version )

0
snSMART: Small N Sequential Multiple Assignment Randomized Trial Methods (Version 0.2.4)

2022
sns: Stochastic Newton Sampler (SNS) (Version 1.2.2)

2014
spAbundance Abundance: (Version )

0
spBayes: Univariate and Multivariate Spatial-Temporal Modeling (Version 0.4-8)

2006
spBayesSurv Data: (Version )

0
spCP: Spatially Varying Change Points (Version 1.4.0)

2018
spOccupancy Models: (Version )

0
spTDyn: Spatially Varying and Spatio-Temporal Dynamic Linear Models (Version 2.0.3)

2015
spTimer: Spatio-Temporal Bayesian Modelling (Version 3.3.3)

2012
sparsesurv: Forecasting and Early Outbreak Detection for Sparse Count Data (Version 0.1.1)

2025
spatialreg: Spatial Regression Analysis (Version 1.4-2)

2019
spsurv: Bernstein Polynomial Based Semiparametric Survival Analysis (Version 1.0.0)

2020
statnet.common Software: (Version )

0
stocc: Fit a Spatial Occupancy Model via Gibbs Sampling (Version 1.31)

2012
stochvol Models: (Version )

0
superdiag Nonconvergence: (Version )

0
surveillance Phenomena: (Version )

0
swfscMisc: Miscellaneous Functions for Southwest Fisheries Science Center (Version 1.7)

2014
systemicrisk: Systemic Risk and Network Reconstruction (Version 0.4.3)

2015
tbea: Pre- And Post-Processing in Bayesian Evolutionary Analyses (Version 1.7.0)

2024
texreg: Conversion of R Regression Output to LaTeX or HTML Tables (Version 1.39.5)

2012
tidybayes: Tidy Data and 'Geoms' for Bayesian Models (Version 3.0.7)

2018
tidytreatment: Tidy Methods for Bayesian Treatment Effect Models (Version 0.3.2)

2021
topolow: Force-Directed Euclidean Embedding of Dissimilarity Data (Version 2.0.1)

2025
trialr: Clinical Trial Designs in 'rstan' (Version 0.1.6)

2017
unmconf: Modeling with Unmeasured Confounding (Version 1.0.0)

2023
vibass: Materials for Introductory Course on Bayesian Learning (Version 1.0.3)

2025
voigt: The Voigt Distribution (Version 2.0)

2025
walker Coefficients: (Version )

0
womblR: Spatiotemporal Boundary Detection Model for Areal Unit Data (Version 1.0.6)

2017
wv: Wavelet Variance (Version 0.1.3)

2019
yuima: The YUIMA Project Package for SDEs (Version 1.15.34)

2014
zic: Bayesian Inference for Zero-Inflated Count Models (Version 0.9.1)

2009

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